RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 CENPVL3A0A0U1RRI6 287 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 CORTO00230 105 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 SRP19P09132 144 aaKnown RBP11.2□□□□□ -0.62
LIMS2-206ENST00000409754 BRS3P32247 399 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 FBLN7Q53RD9 439 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 GCSAMLQ5JQS6 135 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 RXFP4Q8TDU9 374 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 FNDC4Q9H6D8 234 aaPredicted RBP11.2□□□□□ -0.62
LIMS2-206ENST00000409754 WNK2Q9Y3S1 2297 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 F11RQ9Y624 299 aaKnown RBP11.2□□□□□ -0.62
LIMS2-206ENST00000409754 IGKV1OR2-108A0A075B7D4 117 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 A0A1W2PPV4 95 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 TSPAN9O75954 239 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 CNIH1O95406 144 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 CRYGCP07315 174 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 LINC00869P0C866 280 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 FAM106CPP0CH98 169 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 TMEM11P17152 192 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 TAGLN2P37802 199 aaKnown RBP11.2□□□□□ -0.62
LIMS2-206ENST00000409754 RBMS3Q6XE24 437 aaKnown RBP11.2□□□□□ -0.62
LIMS2-206ENST00000409754 OR2T6Q8NHC8 308 aa11.2□□□□□ -0.62
LIMS2-206ENST00000409754 SONP18583 2426 aaKnown RBP11.2□□□□□ -0.62
LIMS2-206ENST00000409754 NF1P21359 2839 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 PLXNB1O43157 2135 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 ZFP92A6NM28 416 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 HMGB3O15347 200 aaKnown RBP11.19□□□□□ -0.62
LIMS2-206ENST00000409754 EIF3GO75821 320 aaKnown RBP eCLIP11.19□□□□□ -0.62
LIMS2-206ENST00000409754 MSMBP08118 114 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 OR10J1P30954 320 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 MFAP2P55001 183 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 FXYD3Q14802 87 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 SOHLH1Q5JUK2 328 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 THAP8Q8NA92 274 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 C1RLQ9NZP8 487 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 VAX2Q9UIW0 290 aa11.19□□□□□ -0.62
LIMS2-206ENST00000409754 IGHV1-69DA0A0B4J2H0 117 aa11.18□□□□□ -0.62
LIMS2-206ENST00000409754 SMAD7O15105 426 aaKnown RBP11.18□□□□□ -0.62
LIMS2-206ENST00000409754 IGHV1-69P01742 117 aa11.18□□□□□ -0.62
LIMS2-206ENST00000409754 DEFA4P12838 97 aa11.18□□□□□ -0.62
LIMS2-206ENST00000409754 LOXL1Q08397 574 aaPredicted RBP11.18□□□□□ -0.62
LIMS2-206ENST00000409754 BTN1A1Q13410 526 aa11.18□□□□□ -0.62
LIMS2-206ENST00000409754 ZNF562Q6V9R5 426 aa11.18□□□□□ -0.62
LIMS2-206ENST00000409754 SLC35E3Q7Z769 313 aa11.18□□□□□ -0.62
LIMS2-206ENST00000409754 ABHD5Q8WTS1 349 aa11.18□□□□□ -0.62
LIMS2-206ENST00000409754 MISP3Q96FF7 219 aa11.18□□□□□ -0.62
LIMS2-206ENST00000409754 ACY3Q96HD9 319 aa11.18□□□□□ -0.62
LIMS2-206ENST00000409754 MANBALQ9NQG1 85 aa11.18□□□□□ -0.62
LIMS2-206ENST00000409754 MXRA5Q9NR99 2828 aa11.18□□□□□ -0.62
LIMS2-206ENST00000409754 NCBP2LA6PVI3 153 aaKnown RBP11.17□□□□□ -0.62
LIMS2-206ENST00000409754 B4DSR2 109 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 NDUFS6O75380 124 aaKnown RBP11.17□□□□□ -0.62
LIMS2-206ENST00000409754 STAG3L2P0CL84 134 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 STAG3L3P0CL85 134 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 APELAP0DMC3 54 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 CTRB1P17538 263 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 PSMB3P49720 205 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 RHOBP62745 196 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 CTRB2Q6GPI1 263 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 CLRN3Q8NCR9 226 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 NPIPB3Q92617 1050 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 C19orf24Q9BVV8 132 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 TMPRSS5Q9H3S3 457 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 NIPBLQ6KC79 2804 aaeCLIP11.17□□□□□ -0.62
LIMS2-206ENST00000409754 FN1P02751 2386 aaKnown RBP11.17□□□□□ -0.62
LIMS2-206ENST00000409754 NAV3Q8IVL0 2385 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 NPBWR1P48145 328 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 FAM120AOSQ5T036 256 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 OR1L6Q8NGR2 347 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 C22orf15Q8WYQ4 148 aa11.17□□□□□ -0.62
LIMS2-206ENST00000409754 GSX1Q9H4S2 264 aaPredicted RBP11.17□□□□□ -0.62
LIMS2-206ENST00000409754 ZFHX3Q15911 3703 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 TRAV20A0A0B4J274 112 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 TCRBV4S1A1TA0A5B7 111 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 CXorf1O96002 111 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 CD99P14209 185 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 GATA3P23771 443 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 RND2P52198 227 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 CX3CL1P78423 397 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 C19orf35Q6ZS72 473 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 CYB561D1Q8N8Q1 229 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 Q8N9W7 124 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 TMEM116Q8NCL8 245 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 ARPC1AQ92747 370 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 SLC25A33Q9BSK2 321 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 WNT10AQ9GZT5 417 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 MRPL36Q9P0J6 103 aaKnown RBP11.16□□□□□ -0.62
LIMS2-206ENST00000409754 DMRT1Q9Y5R6 373 aa11.16□□□□□ -0.62
LIMS2-206ENST00000409754 IGKV1D-37A0A075B6S9 117 aa11.15□□□□□ -0.62
LIMS2-206ENST00000409754 TRAV40A0A0B4J280 105 aa11.15□□□□□ -0.62
LIMS2-206ENST00000409754 DNASE2O00115 360 aaPredicted RBP11.15□□□□□ -0.62
LIMS2-206ENST00000409754 MT-CO2P00403 227 aa11.15□□□□□ -0.62
LIMS2-206ENST00000409754 FBP1P09467 338 aa11.15□□□□□ -0.62
LIMS2-206ENST00000409754 IGHV4-31P0DP07 118 aa11.15□□□□□ -0.62
LIMS2-206ENST00000409754 SELENOTP62341 195 aa11.15□□□□□ -0.62
LIMS2-206ENST00000409754 MEF2BQ02080 365 aaPredicted RBP11.15□□□□□ -0.62
LIMS2-206ENST00000409754 RUSC1-AS1Q66K80 236 aa11.15□□□□□ -0.62
LIMS2-206ENST00000409754 NANPQ8TBE9 248 aa11.15□□□□□ -0.62
LIMS2-206ENST00000409754 SEPSECSQ9HD40 501 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms