RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 C15orf32Q32M92 178 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 LINC00305Q7Z4B0 112 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 Q8TCH9 128 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 SMIM8Q96KF7 97 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 TACC2O95359 2948 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 NDUFB4O95168 129 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 OR2C1O95371 312 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 TMEM249Q2WGJ8 235 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 C1orf122Q6ZSJ8 110 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 ASB13Q8WXK3 278 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 DNAJC4Q9NNZ3 241 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 VENTXO95231 258 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 IGHV2-5P01817 119 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 ORM1P02763 201 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 CD33P20138 364 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 LAMTOR1Q6IAA8 161 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.23□□□□□ -0.93
SNX13-202ENST00000409604 IL22RA2Q969J5 263 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 SIGLEC9Q9Y336 463 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 KPTNQ9Y664 436 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 DSCR9P59020 149 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 C5orf64Q2M2E5 130 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 TEX36Q5VZQ5 186 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 IGFL4Q6B9Z1 124 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 CYB561D1Q8N8Q1 229 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 PRSS22Q9GZN4 317 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 VSIRQ9H7M9 311 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 GNG4P50150 75 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 IFITM2Q01629 132 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 PAX5Q02548 391 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 SCGB2A2Q13296 93 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 TMEM41BQ5BJD5 291 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 CLLU1Q5K131 121 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 AQP10Q96PS8 301 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 METTL26Q96S19 204 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 TRAV5A0A0B4J249 113 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 ZNF705GA8MUZ8 300 aaPredicted RBP9.22□□□□□ -0.93
SNX13-202ENST00000409604 IL6RP08887 468 aaPredicted RBP9.22□□□□□ -0.93
SNX13-202ENST00000409604 NMBP08949 121 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 VDAC2P45880 294 aaPredicted RBP9.22□□□□□ -0.93
SNX13-202ENST00000409604 RITA1Q96K30 269 aa9.22□□□□□ -0.93
SNX13-202ENST00000409604 IGHV1-69DA0A0B4J2H0 117 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 C1orf196B1AJZ1 125 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 IGHV1-69P01742 117 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 NPPCP23582 126 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 ID3Q02535 119 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 DEFB112Q30KQ8 113 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 ASCL2Q99929 193 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 PYYP10082 97 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 MIR17HGQ75NE6 70 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 ZNF738Q8NE65 137 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 PFDN5Q99471 154 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 NPCDR1Q9BY65 106 aa9.21□□□□□ -0.93
SNX13-202ENST00000409604 WDR61Q9GZS3 305 aaKnown RBP9.21□□□□□ -0.93
SNX13-202ENST00000409604 CTXND1A0A1B0GTU2 59 aa9.21□□□□□ -0.94
SNX13-202ENST00000409604 HOXA3O43365 443 aaPredicted RBP9.21□□□□□ -0.94
SNX13-202ENST00000409604 LHBP01229 141 aa9.21□□□□□ -0.94
SNX13-202ENST00000409604 IGKV1-39P01597 117 aa9.21□□□□□ -0.94
SNX13-202ENST00000409604 IGKV1D-39P04432 117 aa9.21□□□□□ -0.94
SNX13-202ENST00000409604 CRYBB3P26998 211 aa9.21□□□□□ -0.94
SNX13-202ENST00000409604 RPL15P61313 204 aaKnown RBP9.21□□□□□ -0.94
SNX13-202ENST00000409604 BLCAPP62952 87 aa9.21□□□□□ -0.94
SNX13-202ENST00000409604 FAM106AQ4KMX7 169 aa9.21□□□□□ -0.94
SNX13-202ENST00000409604 TM4SF20Q53R12 229 aa9.21□□□□□ -0.94
SNX13-202ENST00000409604 PRR31Q5SQ13 230 aa9.21□□□□□ -0.94
SNX13-202ENST00000409604 BCL6BQ8N143 479 aaPredicted RBP9.21□□□□□ -0.94
SNX13-202ENST00000409604 WFDC1Q9HC57 220 aa9.21□□□□□ -0.94
SNX13-202ENST00000409604 TRAV41A0A0B4J266 112 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 TMEM30BQ3MIR4 351 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 C3orf36Q3SXR2 165 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 FAM24BQ8N5W8 94 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 EEF1AKMT3Q96AZ1 226 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 NKX6-2Q9C056 277 aaPredicted RBP9.2□□□□□ -0.94
SNX13-202ENST00000409604 LAMA5O15230 3695 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 SEC11BP0C7V7 166 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 KRTAP27-1Q3LI81 207 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 FBXL19-AS1Q494R0 122 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 NMSQ5H8A3 153 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 OR4X2Q8NGF9 303 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 TOLLIPQ9H0E2 274 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 FAM90A26D6RGX4 464 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 F5H697 171 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 ATP6V0E1O15342 81 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 RELBQ01201 579 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 SLC35B3Q9H1N7 401 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 PTPRBP23467 1997 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 ADAMTS20P59510 1910 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 M0R1W7 72 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 BMPR1BO00238 502 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 TMEM50AO95807 157 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 ICAM4Q14773 271 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 KCNIP4Q6PIL6 250 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 BAGE2Q86Y30 109 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 RCC1LQ96I51 464 aaKnown RBP9.2□□□□□ -0.94
SNX13-202ENST00000409604 CTDSP1Q9GZU7 261 aa9.2□□□□□ -0.94
SNX13-202ENST00000409604 TRAV20A0A0B4J274 112 aa9.19□□□□□ -0.94
SNX13-202ENST00000409604 A0A1W2PPI3 338 aa9.19□□□□□ -0.94
SNX13-202ENST00000409604 TCRBV4S1A1TA0A5B7 111 aa9.19□□□□□ -0.94
SNX13-202ENST00000409604 LYPD6Q86Y78 171 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms