RNA–Protein interactions for RNA: ENST00000409551.7

PAX3-207, Transcript of paired box 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-207ENST00000409551 FAM106CPP0CH98 169 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 TMEM11P17152 192 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 CD24P25063 80 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 TAGLN2P37802 199 aaKnown RBP13.25□□□□□ -0.29
PAX3-207ENST00000409551 MLANAQ16655 118 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 ATRAIDQ6UW56 229 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 RBMS3Q6XE24 437 aaKnown RBP13.25□□□□□ -0.29
PAX3-207ENST00000409551 CIARTQ8N365 385 aaPredicted RBP13.25□□□□□ -0.29
PAX3-207ENST00000409551 NKX6-2Q9C056 277 aaPredicted RBP13.25□□□□□ -0.29
PAX3-207ENST00000409551 IGKV1OR2-108A0A075B7D4 117 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 LINC00869P0C866 280 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 FBLN7Q53RD9 439 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 GCSAMLQ5JQS6 135 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 RXFP4Q8TDU9 374 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 TMUB1Q9BVT8 246 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 C1RLQ9NZP8 487 aa13.25□□□□□ -0.29
PAX3-207ENST00000409551 IGHV1-69DA0A0B4J2H0 117 aa13.24□□□□□ -0.29
PAX3-207ENST00000409551 ZFP92A6NM28 416 aa13.24□□□□□ -0.29
PAX3-207ENST00000409551 IGHV1-69P01742 117 aa13.24□□□□□ -0.29
PAX3-207ENST00000409551 OR10J1P30954 320 aa13.24□□□□□ -0.29
PAX3-207ENST00000409551 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
PAX3-207ENST00000409551 THAP8Q8NA92 274 aa13.24□□□□□ -0.29
PAX3-207ENST00000409551 MAPK1IP1LQ8NDC0 245 aa13.24□□□□□ -0.29
PAX3-207ENST00000409551 OR2T6Q8NHC8 308 aa13.24□□□□□ -0.29
PAX3-207ENST00000409551 VAX2Q9UIW0 290 aa13.24□□□□□ -0.29
PAX3-207ENST00000409551 B4DSR2 109 aa13.23□□□□□ -0.29
PAX3-207ENST00000409551 RNF223E7ERA6 249 aa13.23□□□□□ -0.29
PAX3-207ENST00000409551 NDUFS6O75380 124 aaKnown RBP13.23□□□□□ -0.29
PAX3-207ENST00000409551 MFAP2P55001 183 aa13.23□□□□□ -0.29
PAX3-207ENST00000409551 FXYD3Q14802 87 aa13.23□□□□□ -0.29
PAX3-207ENST00000409551 ZNF562Q6V9R5 426 aa13.23□□□□□ -0.29
PAX3-207ENST00000409551 OR1L6Q8NGR2 347 aa13.23□□□□□ -0.29
PAX3-207ENST00000409551 ABHD5Q8WTS1 349 aa13.23□□□□□ -0.29
PAX3-207ENST00000409551 ACY3Q96HD9 319 aa13.23□□□□□ -0.29
PAX3-207ENST00000409551 MANBALQ9NQG1 85 aa13.23□□□□□ -0.29
PAX3-207ENST00000409551 STAG3L2P0CL84 134 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 STAG3L3P0CL85 134 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 PSMB3P49720 205 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 RHOBP62745 196 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 CYP2G1PQ6ZSU1 146 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 SLC35E3Q7Z769 313 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 MISP3Q96FF7 219 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 SMR3AQ99954 134 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 C19orf24Q9BVV8 132 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 ZFHX3Q15911 3703 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 TRAV20A0A0B4J274 112 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 NCBP2LA6PVI3 153 aaKnown RBP13.22□□□□□ -0.29
PAX3-207ENST00000409551 HMGB3O15347 200 aaKnown RBP13.22□□□□□ -0.29
PAX3-207ENST00000409551 EIF3GO75821 320 aaKnown RBP eCLIP13.22□□□□□ -0.29
PAX3-207ENST00000409551 CTRB1P17538 263 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 GATA3P23771 443 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 SOHLH1Q5JUK2 328 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 CTRB2Q6GPI1 263 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 C22orf15Q8WYQ4 148 aa13.22□□□□□ -0.29
PAX3-207ENST00000409551 DEFA4P12838 97 aa13.21□□□□□ -0.29
PAX3-207ENST00000409551 BTN1A1Q13410 526 aa13.21□□□□□ -0.29
PAX3-207ENST00000409551 FAM120AOSQ5T036 256 aa13.21□□□□□ -0.29
PAX3-207ENST00000409551 Q8N9W7 124 aa13.21□□□□□ -0.29
PAX3-207ENST00000409551 CLRN3Q8NCR9 226 aa13.21□□□□□ -0.29
PAX3-207ENST00000409551 NPIPB3Q92617 1050 aa13.21□□□□□ -0.29
PAX3-207ENST00000409551 TMPRSS5Q9H3S3 457 aa13.21□□□□□ -0.29
PAX3-207ENST00000409551 SETD2Q9BYW2 2564 aaPredicted RBP13.21□□□□□ -0.29
PAX3-207ENST00000409551 A0A096LNT2 108 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 TCRBV4S1A1TA0A5B7 111 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 CXorf1O96002 111 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 APELAP0DMC3 54 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 SELENOTP62341 195 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 CX3CL1P78423 397 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 TMEM116Q8NCL8 245 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 ARPC1AQ92747 370 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 IGKV1D-37A0A075B6S9 117 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 TRAV40A0A0B4J280 105 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 MT-CO2P00403 227 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 HLA-DRB1P01911 266 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 NPBWR1P48145 328 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 RND2P52198 227 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 SLC25A33Q9BSK2 321 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 WNT10AQ9GZT5 417 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 MEGF9Q9H1U4 602 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 GSX1Q9H4S2 264 aaPredicted RBP13.2□□□□□ -0.3
PAX3-207ENST00000409551 MRPL36Q9P0J6 103 aaKnown RBP13.2□□□□□ -0.3
PAX3-207ENST00000409551 DMRT1Q9Y5R6 373 aa13.2□□□□□ -0.3
PAX3-207ENST00000409551 ABCA1O95477 2261 aa13.19□□□□□ -0.3
PAX3-207ENST00000409551 NPIPB5A8MRT5 1133 aa13.19□□□□□ -0.3
PAX3-207ENST00000409551 MEF2BQ02080 365 aaPredicted RBP13.19□□□□□ -0.3
PAX3-207ENST00000409551 RUSC1-AS1Q66K80 236 aa13.19□□□□□ -0.3
PAX3-207ENST00000409551 C19orf35Q6ZS72 473 aa13.19□□□□□ -0.3
PAX3-207ENST00000409551 Q71RC1 249 aaPredicted RBP13.19□□□□□ -0.3
PAX3-207ENST00000409551 CYB561D1Q8N8Q1 229 aa13.19□□□□□ -0.3
PAX3-207ENST00000409551 NANPQ8TBE9 248 aa13.19□□□□□ -0.3
PAX3-207ENST00000409551 RNF2Q99496 336 aa13.19□□□□□ -0.3
PAX3-207ENST00000409551 TRGV9Q99603 122 aa13.19□□□□□ -0.3
PAX3-207ENST00000409551 C7orf69Q9H7B7 122 aa13.19□□□□□ -0.3
PAX3-207ENST00000409551 FUT9Q9Y231 359 aa13.19□□□□□ -0.3
PAX3-207ENST00000409551 DNASE2O00115 360 aaPredicted RBP13.18□□□□□ -0.3
PAX3-207ENST00000409551 FBP1P09467 338 aa13.18□□□□□ -0.3
PAX3-207ENST00000409551 OR5G3P0C626 314 aa13.18□□□□□ -0.3
PAX3-207ENST00000409551 LINC01356Q8N9X3 169 aa13.18□□□□□ -0.3
PAX3-207ENST00000409551 SEPSECSQ9HD40 501 aaKnown RBP13.18□□□□□ -0.3
PAX3-207ENST00000409551 HIF1ANQ9NWT6 349 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms