RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 INO80EQ8NBZ0 244 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 CITED2Q99967 270 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 ZC4H2Q9NQZ6 224 aa12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 TSSC4Q9Y5U2 329 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 IGSF23A1L1A6 192 aa12.81□□□□□ -0.36
TSPAN4-208ENST00000409531 G3V3Q6 166 aa12.81□□□□□ -0.36
TSPAN4-208ENST00000409531 K7EIM0 57 aa12.81□□□□□ -0.36
TSPAN4-208ENST00000409531 RPL12P30050 165 aaKnown RBP12.81□□□□□ -0.36
TSPAN4-208ENST00000409531 TCTEX1D4Q5JR98 221 aa12.81□□□□□ -0.36
TSPAN4-208ENST00000409531 NDUFA11Q86Y39 141 aa12.81□□□□□ -0.36
TSPAN4-208ENST00000409531 SCARB1Q8WTV0 552 aa12.81□□□□□ -0.36
TSPAN4-208ENST00000409531 ATP6V0BQ99437 205 aa12.81□□□□□ -0.36
TSPAN4-208ENST00000409531 GAR1Q9NY12 217 aaKnown RBP12.81□□□□□ -0.36
TSPAN4-208ENST00000409531 PMS2P5A8MQ11 134 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 PRSS46E5RG02 174 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 SMLR1H3BR10 107 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 PFDN1O60925 122 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 SCGB2A1O75556 95 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 CST7O76096 145 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 TSPAN15O95858 294 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 S100A11P31949 105 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 NPBWR1P48145 328 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 MFAP4P55083 255 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 DEFA5Q01523 94 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 EWSR1Q01844 656 aaKnown RBP eCLIP12.8□□□□□ -0.363e-6■■■■□ 20.6
TSPAN4-208ENST00000409531 KIAA0141Q14154 515 aaPredicted RBP12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 SLC16A13Q7RTY0 426 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 SLC35E1Q96K37 410 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 TXN2Q99757 166 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 NEURL2Q9BR09 285 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 GGACTQ9BVM4 153 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 FNDC4Q9H6D8 234 aaPredicted RBP12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 C21orf62Q9NYP8 219 aa12.8□□□□□ -0.36
TSPAN4-208ENST00000409531 VWFP04275 2813 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 MFSD2BA6NFX1 497 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 HMSDA8MTL9 139 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 FNDC10F2Z333 226 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 C1QBP02746 253 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 DLK1P80370 383 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 SLC38A11Q08AI6 406 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 ATP6V1FQ16864 119 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 NSUN5P1Q3KNT7 163 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 ZNF343Q6P1L6 599 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 ACSM6Q6P461 480 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 LILRB2Q8N423 598 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 TMEM217Q8N7C4 229 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 ZNF502Q8TBZ5 544 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 C4orf3Q8WVX3 66 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 AQP10Q96PS8 301 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 TNFSF18Q9UNG2 199 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 HSPB11Q9Y547 144 aa12.79□□□□□ -0.36
TSPAN4-208ENST00000409531 IGHV3-21A0A0B4J1V1 117 aa12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 NUDT19A8MXV4 375 aa12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 IGHV3-11P01762 117 aa12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 LGALS1P09382 135 aaKnown RBP12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 FCGR2BP31994 310 aaPredicted RBP12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 NHLH2Q02577 135 aa12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 ACOT7LQ6ZUV0 252 aa12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 TMEM116Q8NCL8 245 aa12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 KLHL30-AS1Q8NEE0 82 aa12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 OR1S2Q8NGQ3 325 aa12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 OR4X1Q8NH49 305 aa12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 HYLS1Q96M11 299 aa12.78□□□□□ -0.36
TSPAN4-208ENST00000409531 MEGF8Q7Z7M0 2845 aa12.77□□□□□ -0.36
TSPAN4-208ENST00000409531 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.77□□□□□ -0.37
TSPAN4-208ENST00000409531 ARPC5O15511 151 aa12.77□□□□□ -0.37
TSPAN4-208ENST00000409531 RUNX1Q01196 453 aa12.77□□□□□ -0.37
TSPAN4-208ENST00000409531 MLANAQ16655 118 aa12.77□□□□□ -0.37
TSPAN4-208ENST00000409531 ZFP69Q49AA0 526 aa12.77□□□□□ -0.37
TSPAN4-208ENST00000409531 Q56UQ5 140 aa12.77□□□□□ -0.37
TSPAN4-208ENST00000409531 HAPLN4Q86UW8 402 aa12.77□□□□□ -0.37
TSPAN4-208ENST00000409531 UBAC2Q8NBM4 344 aa12.77□□□□□ -0.37
TSPAN4-208ENST00000409531 BSCL2Q96G97 398 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-208ENST00000409531 TRAV30A0A087WSZ9 112 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 I3L521 148 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 GNG7O60262 68 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 IGHV3-48P01763 117 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 RND2P52198 227 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 AKR1C1Q04828 323 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 ARL16Q0P5N6 197 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 GAMTQ14353 236 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 SPSB3Q6PJ21 355 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 CLEC19AQ6UXS0 136 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 OR4F17Q8NGA8 305 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 OR5C1Q8NGR4 320 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 ACY3Q96HD9 319 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 CCDC140Q96MF4 163 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 OR4F4Q96R69 305 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 MFFQ9GZY8 342 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 GNB4Q9HAV0 340 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 NPVFQ9HCQ7 196 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 UQCC1Q9NVA1 299 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 PEF1Q9UBV8 284 aaKnown RBP12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 S4R3C0 116 aa12.76□□□□□ -0.37
TSPAN4-208ENST00000409531 SMCO3A2RU48 225 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 RNF222A6NCQ9 220 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 CLN5O75503 358 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 DFFBO76075 338 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 IGHV3-23P01764 117 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms