RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 FLYWCH2Q96CP2 140 aaKnown RBP3.1□□□□□ -1.91
RTN4-209ENST00000405240 RITA1Q96K30 269 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 SNHG12Q9BXW3 62 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 ZNF430Q9H8G1 570 aaPredicted RBP3.1□□□□□ -1.91
RTN4-209ENST00000405240 GNB4Q9HAV0 340 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 LOC400499M0QZD8 3231 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 PPIAL4EA0A075B759 164 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 A0A1W2PS18 150 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 PPIAL4DF5H284 164 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 BMPR1BO00238 502 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 EREGO14944 169 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 IGLV1-47P01700 117 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 APOA2P02652 100 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 PPIAL4FP0DN26 164 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 CRISP2P16562 243 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 MC5RP33032 325 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 LGALS7P47929 136 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 DIAPH2-AS1Q14236 149 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 GDF5OSQ5U4N7 250 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 DMRTA1Q5VZB9 504 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 LYPD2Q6UXB3 125 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 NIT1Q86X76 327 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 MRPL41Q8IXM3 137 aaKnown RBP3.1□□□□□ -1.91
RTN4-209ENST00000405240 OR1L4Q8NGR5 311 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 GRAMD2BQ96HH9 432 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 MS4A10Q96PG2 267 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 RNASE7Q9H1E1 156 aaKnown RBP3.1□□□□□ -1.91
RTN4-209ENST00000405240 WASHC3Q9Y3C0 194 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 PPIAL4AQ9Y536 164 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 CACNA1DQ01668 2161 aa3.1□□□□□ -1.91
RTN4-209ENST00000405240 TRAV5A0A0B4J249 113 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 A0A1W2PPI3 338 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 GRIFINA4D1Z8 144 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 C19orf71A6NCJ1 209 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 NPIPB6E9PJ23 425 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 C16orf97H3BN30 126 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 HLA-DQA1P01909 254 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 GP9P14770 177 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 CCL3L1P16619 93 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 GATA2P23769 480 aaPredicted RBP3.09□□□□□ -1.91
RTN4-209ENST00000405240 ERHP84090 104 aaKnown RBP3.09□□□□□ -1.91
RTN4-209ENST00000405240 BSPH1Q075Z2 132 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 TCF15Q12870 199 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 CT83Q5H943 113 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 TOMM20LQ6UXN7 152 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 OR8I2Q8N0Y5 310 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 OR5T1Q8NG75 326 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 KCNS1Q96KK3 526 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 HARBI1Q96MB7 349 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 SRSF8Q9BRL6 282 aaKnown RBP3.09□□□□□ -1.91
RTN4-209ENST00000405240 MIEN1Q9BRT3 115 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 TMEM14CQ9P0S9 112 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 ZNF492Q9P255 531 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 VWC2LB2RUY7 222 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 TEX22C9J3V5 150 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 FCN1O00602 326 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 ACTL6BO94805 426 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 LTAP01374 205 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 IGHV1-8P0DP01 117 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 IRF2P14316 349 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 CHRNB4P30926 498 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 CDKN1AP38936 164 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 IER3P46695 156 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 TDRG1Q3Y452 100 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 IBA57Q5T440 356 aaKnown RBP3.09□□□□□ -1.91
RTN4-209ENST00000405240 ATP5L2Q7Z4Y8 100 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 FAM168AQ92567 244 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 PSMG3-AS1Q96PY0 264 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 RNF5Q99942 180 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 C1RLQ9NZP8 487 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 FBXL7Q9UJT9 491 aa3.09□□□□□ -1.91
RTN4-209ENST00000405240 SNURFLB1AK76 121 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 PEX7O00628 323 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 RNF224P0DH78 156 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 CASP6P55212 293 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 FOXA3P55318 350 aaPredicted RBP3.09□□□□□ -1.92
RTN4-209ENST00000405240 KLK9Q2XQG4 91 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 TIGITQ495A1 244 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 C10orf113Q5VZT2 155 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 VHLLQ6RSH7 139 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 LY6G5BQ8NDX9 201 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 RNASE6Q93091 150 aaKnown RBP3.09□□□□□ -1.92
RTN4-209ENST00000405240 GFRA4Q9GZZ7 299 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 ZNF355PQ9NSJ1 428 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 KLK9Q9UKQ9 250 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 AHCTF1Q8WYP5 2266 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 ZNF785A8K8V0 405 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 ZNF705GA8MUZ8 300 aaPredicted RBP3.09□□□□□ -1.92
RTN4-209ENST00000405240 E7EQL1 145 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 M0QZK8 103 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 TOMM40O96008 361 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 IGLV2-11P01706 119 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 HNF1AP20823 631 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 BRS3P32247 399 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 SUB1P53999 127 aaKnown RBP eCLIP3.09□□□□□ -1.927e-16■■■□□ 18.3
RTN4-209ENST00000405240 SUMO1P63165 101 aaKnown RBP3.09□□□□□ -1.92
RTN4-209ENST00000405240 ETFRF1Q6IPR1 90 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 DEFB108BQ8NET1 73 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 NUDT10Q8NFP7 164 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 STXBP6Q8NFX7 210 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms