RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 VWC2LB2RUY7 222 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 C9orf172C9J069 976 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 ORM2P19652 201 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 KLF3P57682 345 aaPredicted RBP7.82□□□□□ -1.16
SMC1B-202ENST00000404354 UBE2G1P62253 170 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 PRR20EP86478 221 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 PRR20CP86479 221 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 PRR20DP86480 221 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 PRR20BP86481 221 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 PRR20AP86496 221 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 FOXE3Q13461 319 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 COTL1Q14019 142 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 TXNDC17Q9BRA2 123 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 IDI2-AS1Q9NZ38 188 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 A0A087X0K7 114 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 MUC21A0A0G2JKD1 596 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 MUC21A0A140T8X8 626 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 MT-ND6P03923 174 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 ADH4P08319 380 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 CECR9P0C854 216 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 MUC21Q5SSG8 566 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 AMMECR1LQ6DCA0 310 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 Q71RC1 249 aaPredicted RBP7.81□□□□□ -1.16
SMC1B-202ENST00000404354 OR4S2Q8NH73 311 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 C11orf52Q96A22 123 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 PGLYRP4Q96LB8 373 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 OSTCQ9NRP0 149 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 TRAV9-2A0A087WT02 112 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 IGHV2OR16-5A0A0B4J2B6 119 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 E7EUB6 86 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 HES4Q9HCC6 221 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 TMEM167BQ9NRX6 74 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 CALYQ9NYX4 217 aa7.81□□□□□ -1.16
SMC1B-202ENST00000404354 CRYABP02511 175 aaKnown RBP7.8□□□□□ -1.16
SMC1B-202ENST00000404354 TNFSF4P23510 183 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 UQCRFS1P47985 274 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 MSMPQ1L6U9 139 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 ORAOV1Q8WV07 137 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 TPPP3Q9BW30 176 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 A0A1W2PRD5 423 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 A0A1W2PRF3 423 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 A0A1W2PRM7 423 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 IZUMO1RA6ND01 250 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 LOXL3P58215 753 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 PEAR1Q5VY43 1037 aaPredicted RBP7.8□□□□□ -1.16
SMC1B-202ENST00000404354 ZCCHC24Q8N2G6 241 aaKnown RBP7.8□□□□□ -1.16
SMC1B-202ENST00000404354 OR2V2Q96R30 315 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 TRBV9A0A0B4J1U6 114 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 MOSP00540 346 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 PPOXP50336 477 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 FXYD7P58549 80 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 GABRA6Q16445 453 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 OR4F17Q8NGA8 305 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 OR8B3Q8NGG8 313 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 NPIPB3Q92617 1050 aa7.8□□□□□ -1.16
SMC1B-202ENST00000404354 TRAV8-1A0A0A6YYK1 113 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 A0A1W2PNU3 283 aaPredicted RBP7.79□□□□□ -1.16
SMC1B-202ENST00000404354 KLRC4-KLRK1H3BQV0 150 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 CYC1P08574 325 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 C8orf88P0DMB2 117 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 GCSAMQ8N6F7 178 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 TMEM116Q8NCL8 245 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 SLC25A33Q9BSK2 321 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 SMIM27A0A1W2PRY6 76 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 COX7A2P2O60397 106 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 TBR1Q16650 682 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 TMEM249Q2WGJ8 235 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 LINC00322Q6ZN03 302 aaPredicted RBP7.79□□□□□ -1.16
SMC1B-202ENST00000404354 CCL13Q99616 98 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 GSX1Q9H4S2 264 aaPredicted RBP7.79□□□□□ -1.16
SMC1B-202ENST00000404354 PTPRBP23467 1997 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 TRAV9-1A0A075B6T8 112 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 IGHV2-26A0A0B4J1V2 119 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 IGLC7A0M8Q6 106 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 ZNF891A8MT65 544 aaPredicted RBP7.79□□□□□ -1.16
SMC1B-202ENST00000404354 SLC25A5P05141 298 aaKnown RBP7.79□□□□□ -1.16
SMC1B-202ENST00000404354 FAM216BQ8N7L0 139 aa7.79□□□□□ -1.16
SMC1B-202ENST00000404354 TNRC6BQ9UPQ9 1833 aaKnown RBP7.78□□□□□ -1.16
SMC1B-202ENST00000404354 C2orf70A6NJV1 201 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 KLK10O43240 276 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 APOA2P02652 100 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 TMPRSS3P57727 454 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 TAS2R45P59539 299 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 SRSF6Q13247 344 aaKnown RBP7.78□□□□□ -1.16
SMC1B-202ENST00000404354 HCP5Q6MZN7 132 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 TDHQ8IZJ6 230 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 MRPL36Q9P0J6 103 aaKnown RBP7.78□□□□□ -1.16
SMC1B-202ENST00000404354 ABCA4P78363 2273 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 IGHV3-72A0A0B4J1Y9 119 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 TEX50A0A1B0GTY4 177 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 PGPA6NDG6 321 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 DLX1P56177 255 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 RIPPLY3P57055 190 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 RUSC1-AS1Q66K80 236 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 FAM90A1Q86YD7 464 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 ITLN1Q8WWA0 313 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 FLYWCH2Q96CP2 140 aaKnown RBP7.78□□□□□ -1.16
SMC1B-202ENST00000404354 URB1-AS1Q96HZ7 61 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 IGF2BP2-AS1Q96M15 143 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms