RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 THAP8Q8NA92 274 aa20.27■□□□□ 0.84
CPNE1-205ENST00000401607 IGKV1D-37A0A075B6S9 117 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 F8W036 122 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 J3QLI3 93 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 RND2P52198 227 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 RASL11BQ9BPW5 248 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 HSPB9Q9BQS6 159 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 MT-CO2P00403 227 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 EGR2P11161 476 aaPredicted RBP20.26■□□□□ 0.83
CPNE1-205ENST00000401607 GATA2P23769 480 aaPredicted RBP20.26■□□□□ 0.83
CPNE1-205ENST00000401607 PPT1P50897 306 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 TMEM249Q2WGJ8 235 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 ZNF506Q5JVG8 444 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 SEC11CQ9BY50 192 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 GNG13Q9P2W3 67 aa20.26■□□□□ 0.83
CPNE1-205ENST00000401607 CARHSP1Q9Y2V2 147 aaKnown RBP20.26■□□□□ 0.83
CPNE1-205ENST00000401607 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.25■□□□□ 0.838e-8■■■■□ 20.3
CPNE1-205ENST00000401607 IGHV3-21A0A0B4J1V1 117 aa20.25■□□□□ 0.83
CPNE1-205ENST00000401607 ICAM4Q14773 271 aa20.25■□□□□ 0.83
CPNE1-205ENST00000401607 CYP2G1PQ6ZSU1 146 aa20.25■□□□□ 0.83
CPNE1-205ENST00000401607 LOC102723971A0A1B0GUV8 181 aa20.24■□□□□ 0.83
CPNE1-205ENST00000401607 NPIPB5A8MRT5 1133 aa20.24■□□□□ 0.83
CPNE1-205ENST00000401607 I3L2K1 104 aa20.24■□□□□ 0.83
CPNE1-205ENST00000401607 SCO1O75880 301 aa20.24■□□□□ 0.83
CPNE1-205ENST00000401607 SSX3Q99909 188 aa20.24■□□□□ 0.83
CPNE1-205ENST00000401607 SMDT1Q9H4I9 107 aa20.24■□□□□ 0.83
CPNE1-205ENST00000401607 TMEM219Q86XT9 240 aa20.23■□□□□ 0.83
CPNE1-205ENST00000401607 C5orf56Q8N8D9 126 aa20.23■□□□□ 0.83
CPNE1-205ENST00000401607 RBM14Q96PK6 669 aaKnown RBP20.23■□□□□ 0.83
CPNE1-205ENST00000401607 TMPRSS5Q9H3S3 457 aa20.23■□□□□ 0.83
CPNE1-205ENST00000401607 CENPEQ02224 2701 aa20.23■□□□□ 0.83
CPNE1-205ENST00000401607 A0A1W2PPV4 95 aa20.23■□□□□ 0.83
CPNE1-205ENST00000401607 ZFP92A6NM28 416 aa20.23■□□□□ 0.83
CPNE1-205ENST00000401607 PMS2P11Q13670 270 aa20.23■□□□□ 0.83
CPNE1-205ENST00000401607 TTC9CQ8N5M4 171 aa20.23■□□□□ 0.83
CPNE1-205ENST00000401607 TMEM116Q8NCL8 245 aa20.23■□□□□ 0.83
CPNE1-205ENST00000401607 NBPF19A0A087WUL8 3843 aa20.22■□□□□ 0.83
CPNE1-205ENST00000401607 TCRBV4S1A1TA0A5B7 111 aa20.22■□□□□ 0.83
CPNE1-205ENST00000401607 FBP1P09467 338 aa20.22■□□□□ 0.83
CPNE1-205ENST00000401607 BCL2P10415 239 aa20.22■□□□□ 0.83
CPNE1-205ENST00000401607 GUCA2BQ16661 112 aa20.22■□□□□ 0.83
CPNE1-205ENST00000401607 KHDC3LQ587J8 217 aa20.22■□□□□ 0.83
CPNE1-205ENST00000401607 OR1L6Q8NGR2 347 aa20.22■□□□□ 0.83
CPNE1-205ENST00000401607 ABCA12Q86UK0 2595 aa20.22■□□□□ 0.83
CPNE1-205ENST00000401607 DEFA5Q01523 94 aa20.21■□□□□ 0.83
CPNE1-205ENST00000401607 ZNF90Q03938 601 aa20.21■□□□□ 0.83
CPNE1-205ENST00000401607 SPATA31B1PQ5VZV4 182 aa20.21■□□□□ 0.83
CPNE1-205ENST00000401607 RXFP4Q8TDU9 374 aa20.21■□□□□ 0.83
CPNE1-205ENST00000401607 SEPSECSQ9HD40 501 aaKnown RBP20.21■□□□□ 0.83
CPNE1-205ENST00000401607 MOB4Q9Y3A3 225 aa20.21■□□□□ 0.83
CPNE1-205ENST00000401607 APCP25054 2843 aa20.21■□□□□ 0.83
CPNE1-205ENST00000401607 SH2D7A6NKC9 451 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-205ENST00000401607 K7EIM0 57 aa20.21■□□□□ 0.83
CPNE1-205ENST00000401607 SLC35B3Q9H1N7 401 aa20.21■□□□□ 0.83
CPNE1-205ENST00000401607 SRP19P09132 144 aaKnown RBP20.2■□□□□ 0.82
CPNE1-205ENST00000401607 ATRAIDQ6UW56 229 aa20.2■□□□□ 0.82
CPNE1-205ENST00000401607 C22orf15Q8WYQ4 148 aa20.2■□□□□ 0.82
CPNE1-205ENST00000401607 FANCD2OSQ96PS1 177 aa20.2■□□□□ 0.82
CPNE1-205ENST00000401607 NAV2Q8IVL1 2488 aa20.19■□□□□ 0.82
CPNE1-205ENST00000401607 IGLV11-55A0A075B6I3 123 aa20.19■□□□□ 0.82
CPNE1-205ENST00000401607 HSPB1P04792 205 aaKnown RBP20.19■□□□□ 0.82
CPNE1-205ENST00000401607 STAG3L2P0CL84 134 aa20.19■□□□□ 0.82
CPNE1-205ENST00000401607 STAG3L3P0CL85 134 aa20.19■□□□□ 0.82
CPNE1-205ENST00000401607 RHOBP62745 196 aa20.19■□□□□ 0.82
CPNE1-205ENST00000401607 PSMB11A5LHX3 300 aa20.18■□□□□ 0.82
CPNE1-205ENST00000401607 AMY1AP04745 511 aa20.18■□□□□ 0.82
CPNE1-205ENST00000401607 SGMS2Q8NHU3 365 aa20.18■□□□□ 0.82
CPNE1-205ENST00000401607 TRGV9Q99603 122 aa20.18■□□□□ 0.82
CPNE1-205ENST00000401607 TNFRSF19Q9NS68 423 aa20.18■□□□□ 0.82
CPNE1-205ENST00000401607 A6NDX4 124 aa20.18■□□□□ 0.82
CPNE1-205ENST00000401607 H3BUX3 64 aa20.18■□□□□ 0.82
CPNE1-205ENST00000401607 ATP6V0E1O15342 81 aa20.18■□□□□ 0.82
CPNE1-205ENST00000401607 TSPAN9O75954 239 aa20.18■□□□□ 0.82
CPNE1-205ENST00000401607 IFNA1P01562 189 aa20.18■□□□□ 0.82
CPNE1-205ENST00000401607 SLC35E3Q7Z769 313 aa20.18■□□□□ 0.82
CPNE1-205ENST00000401607 MDFIC2A0A1B0GVS7 189 aa20.17■□□□□ 0.82
CPNE1-205ENST00000401607 FSHBP01225 129 aa20.17■□□□□ 0.82
CPNE1-205ENST00000401607 FAM78BQ5VT40 261 aa20.17■□□□□ 0.82
CPNE1-205ENST00000401607 WFDC11Q8NEX6 87 aa20.17■□□□□ 0.82
CPNE1-205ENST00000401607 OR4X1Q8NH49 305 aa20.17■□□□□ 0.82
CPNE1-205ENST00000401607 GATAD1Q8WUU5 269 aa20.17■□□□□ 0.82
CPNE1-205ENST00000401607 GSX1Q9H4S2 264 aaPredicted RBP20.17■□□□□ 0.82
CPNE1-205ENST00000401607 LINC01548A6NM66 108 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 ARL14EPLP0DKL9 152 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 SELENOTP62341 195 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 LY6EQ16553 131 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 MIR17HGQ75NE6 70 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 IQCF2Q8IXL9 164 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 SVBPQ8N300 66 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 OR5T1Q8NG75 326 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 TMEM37Q8WXS4 190 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 VAX2Q9UIW0 290 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 OR5G3P0C626 314 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 BPIFB3P59826 476 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 RBMS3Q6XE24 437 aaKnown RBP20.16■□□□□ 0.82
CPNE1-205ENST00000401607 BCL6BQ8N143 479 aaPredicted RBP20.16■□□□□ 0.82
CPNE1-205ENST00000401607 FUT9Q9Y231 359 aa20.16■□□□□ 0.82
CPNE1-205ENST00000401607 HELZ2Q9BYK8 2649 aaKnown RBP20.15■□□□□ 0.82
CPNE1-205ENST00000401607 IGLC1P0CG04 106 aa20.15■□□□□ 0.82
CPNE1-205ENST00000401607 PSMB3P49720 205 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms