RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 RNF125Q96EQ8 232 aa15.07■□□□□ 0
COL18A1-204ENST00000400337 FAM166AQ6J272 317 aa15.07■□□□□ 0
COL18A1-204ENST00000400337 C1QTNF9P0C862 333 aa15.07■□□□□ 0
COL18A1-204ENST00000400337 TCRBV4S1A1TA0A5B7 111 aa15.07■□□□□ 0
COL18A1-204ENST00000400337 APOHP02749 345 aaPredicted RBP15.07■□□□□ 0
COL18A1-204ENST00000400337 NUTF2P61970 127 aaKnown RBP15.07■□□□□ 0
COL18A1-204ENST00000400337 C5orf24Q7Z6I8 188 aa15.07■□□□□ 0
COL18A1-204ENST00000400337 ZNF256Q9Y2P7 627 aaPredicted RBP15.06■□□□□ 0
COL18A1-204ENST00000400337 HIGD1CA8MV81 97 aa15.06■□□□□ 0
COL18A1-204ENST00000400337 CD177Q8N6Q3 437 aa15.06■□□□□ 0
COL18A1-204ENST00000400337 OR4X2Q8NGF9 303 aa15.06■□□□□ 0
COL18A1-204ENST00000400337 ZNF414Q96IQ9 312 aa15.06■□□□□ 0
COL18A1-204ENST00000400337 OTORQ9NRC9 128 aa15.06■□□□□ 0
COL18A1-204ENST00000400337 METRNQ9UJH8 293 aa15.06■□□□□ 0
COL18A1-204ENST00000400337 TCF20Q9UGU0 1960 aaKnown RBP15.06■□□□□ 0
COL18A1-204ENST00000400337 ERASQ7Z444 233 aa15.06■□□□□ 0
COL18A1-204ENST00000400337 VSIRQ9H7M9 311 aa15.06■□□□□ 0
COL18A1-204ENST00000400337 WDR83OSQ9Y284 106 aa15.06■□□□□ 0
COL18A1-204ENST00000400337 TBL2Q9Y4P3 447 aaKnown RBP15.06■□□□□ 0
COL18A1-204ENST00000400337 REC114Q7Z4M0 266 aa15.06■□□□□ 0
COL18A1-204ENST00000400337 GEMIN7Q9H840 131 aaKnown RBP15.06■□□□□ 0
COL18A1-204ENST00000400337 TMEM160Q9NX00 188 aa15.06■□□□□ 0
COL18A1-204ENST00000400337 FGF16O43320 207 aa15.05■□□□□ 0
COL18A1-204ENST00000400337 NAPSAO96009 420 aa15.05■□□□□ 0
COL18A1-204ENST00000400337 PLP1P60201 277 aa15.05■□□□□ 0
COL18A1-204ENST00000400337 RHOGP84095 191 aa15.05■□□□□ 0
COL18A1-204ENST00000400337 PVRIGQ6DKI7 326 aa15.05■□□□□ 0
COL18A1-204ENST00000400337 EFNB3Q15768 340 aa15.05■□□□□ -0
COL18A1-204ENST00000400337 C10orf55Q5SWW7 151 aa15.05■□□□□ -0
COL18A1-204ENST00000400337 FER1L6-AS1Q8NA97 138 aa15.05■□□□□ -0
COL18A1-204ENST00000400337 A0A1W2PRX2 142 aa15.05■□□□□ -0
COL18A1-204ENST00000400337 FAM90A9PA6NNJ1 464 aa15.05■□□□□ -0
COL18A1-204ENST00000400337 NPFFO15130 113 aa15.05■□□□□ -0
COL18A1-204ENST00000400337 RNASE4P34096 147 aaKnown RBP15.04■□□□□ -0
COL18A1-204ENST00000400337 ZSWIM8A7E2V4 1837 aa15.04■□□□□ -0
COL18A1-204ENST00000400337 MYO7BQ6PIF6 2116 aa15.04■□□□□ -0
COL18A1-204ENST00000400337 IZUMO1RA6ND01 250 aa15.04■□□□□ -0
COL18A1-204ENST00000400337 TMEM42Q69YG0 159 aa15.04■□□□□ -0
COL18A1-204ENST00000400337 TMEM200BQ69YZ2 307 aa15.04■□□□□ -0
COL18A1-204ENST00000400337 NUP37Q8NFH4 326 aa15.04■□□□□ -0
COL18A1-204ENST00000400337 PGPEP1LA6NFU8 196 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 PARD6GQ9BYG4 376 aaPredicted RBP15.03■□□□□ -0
COL18A1-204ENST00000400337 PSMB11A5LHX3 300 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 MLNRO43193 412 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 CTAG1AP78358 180 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 PAPPA-AS1Q5QFB9 102 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 HEPN1Q6WQI6 88 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 ZNF581Q9P0T4 197 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 SPTAN1Q13813 2472 aaKnown RBP15.03■□□□□ -0
COL18A1-204ENST00000400337 IGHV2-26A0A0B4J1V2 119 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 TNFRSF14Q92956 283 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 DUX3Q96PT4 197 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 EPDR1Q9UM22 224 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 SOX21Q9Y651 276 aaPredicted RBP15.03■□□□□ -0
COL18A1-204ENST00000400337 A0A0G2JNJ9 132 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 TCF23Q7RTU1 214 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 NPFFR1Q9GZQ6 430 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 YAE1D1Q9NRH1 226 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 Q9UFV3 132 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 MOB4Q9Y3A3 225 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 FNDC1Q4ZHG4 1894 aaPredicted RBP15.03■□□□□ -0
COL18A1-204ENST00000400337 FAM19A2Q8N3H0 131 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 PMCHL2Q9BQD1 86 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 TNFRSF18Q9Y5U5 241 aa15.03■□□□□ -0
COL18A1-204ENST00000400337 TRAV40A0A0B4J280 105 aa15.02■□□□□ -0
COL18A1-204ENST00000400337 TMEM178BH3BS89 294 aa15.02■□□□□ -0
COL18A1-204ENST00000400337 MEIG1Q5JSS6 88 aa15.02■□□□□ -0
COL18A1-204ENST00000400337 TREML4Q6UXN2 200 aa15.02■□□□□ -0
COL18A1-204ENST00000400337 DOPEY2Q9Y3R5 2298 aa15.02■□□□□ -0
COL18A1-204ENST00000400337 TRAV8-6A0A0B4J262 113 aa15.02■□□□□ -0
COL18A1-204ENST00000400337 Q6AWC8 147 aa15.02■□□□□ -0
COL18A1-204ENST00000400337 GLMPQ8WWB7 406 aa15.02■□□□□ -0
COL18A1-204ENST00000400337 TMEM170BQ5T4T1 132 aa15.02□□□□□ -0.01
COL18A1-204ENST00000400337 FAM71F2Q6NXP2 309 aa15.02□□□□□ -0.01
COL18A1-204ENST00000400337 ZNF600Q6ZNG1 722 aa15.02□□□□□ -0.01
COL18A1-204ENST00000400337 A0A1W2PRE2 83 aa15.02□□□□□ -0.01
COL18A1-204ENST00000400337 OR11H12B2RN74 326 aa15.02□□□□□ -0.01
COL18A1-204ENST00000400337 QRFPP83859 136 aa15.02□□□□□ -0.01
COL18A1-204ENST00000400337 FHL1Q13642 323 aa15.02□□□□□ -0.01
COL18A1-204ENST00000400337 CIRBPQ14011 172 aaKnown RBP15.02□□□□□ -0.01
COL18A1-204ENST00000400337 OR11H1Q8NG94 326 aa15.02□□□□□ -0.01
COL18A1-204ENST00000400337 OR11H2Q8NH07 326 aa15.02□□□□□ -0.01
COL18A1-204ENST00000400337 LINC00527Q9UJ94 153 aa15.02□□□□□ -0.01
COL18A1-204ENST00000400337 PI4KAP42356 2102 aa15.02□□□□□ -0.01
COL18A1-204ENST00000400337 TRAV9-1A0A075B6T8 112 aa15.01□□□□□ -0.01
COL18A1-204ENST00000400337 H7C1H1 209 aa15.01□□□□□ -0.01
COL18A1-204ENST00000400337 TP53BP1Q12888 1972 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-204ENST00000400337 PLXNA3P51805 1871 aa15.01□□□□□ -0.01
COL18A1-204ENST00000400337 IGHV1-8P0DP01 117 aa15.01□□□□□ -0.01
COL18A1-204ENST00000400337 JOSD1Q15040 202 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-204ENST00000400337 C14orf144Q96I85 54 aa15.01□□□□□ -0.01
COL18A1-204ENST00000400337 TUBA4BQ9H853 241 aa15.01□□□□□ -0.01
COL18A1-204ENST00000400337 MBD3L4A6NDZ8 208 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-204ENST00000400337 MBD3L3A6NE82 208 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-204ENST00000400337 MBD3L5A6NJ08 208 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-204ENST00000400337 MBD3L2Q8NHZ7 208 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-204ENST00000400337 CLDN16Q9Y5I7 305 aa15.01□□□□□ -0.01
COL18A1-204ENST00000400337 A0A1B0GV90 55 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 IGKV1-5P01602 117 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 DOCK8Q8NF50 2099 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms