RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 RARRES2Q99969 163 aa10.02□□□□□ -0.8
CACNA1C-213ENST00000399629 OOSP1A8MZH6 123 aa10.02□□□□□ -0.81
CACNA1C-213ENST00000399629 PRR30Q53SZ7 412 aaPredicted RBP10.02□□□□□ -0.81
CACNA1C-213ENST00000399629 TMEM86BQ8N661 226 aa10.02□□□□□ -0.81
CACNA1C-213ENST00000399629 IGHV1-8P0DP01 117 aa10.02□□□□□ -0.81
CACNA1C-213ENST00000399629 THADAQ6YHU6 1953 aa10.02□□□□□ -0.81
CACNA1C-213ENST00000399629 GATA2P23769 480 aaPredicted RBP10.02□□□□□ -0.81
CACNA1C-213ENST00000399629 MIR17HGQ75NE6 70 aa10.02□□□□□ -0.81
CACNA1C-213ENST00000399629 WBP1Q96G27 269 aa10.02□□□□□ -0.81
CACNA1C-213ENST00000399629 TGIF2-C20orf24A0A0A6YYL0 155 aa10.02□□□□□ -0.81
CACNA1C-213ENST00000399629 LINC00158P58513 81 aa10.02□□□□□ -0.81
CACNA1C-213ENST00000399629 USMG5Q96IX5 58 aa10.02□□□□□ -0.81
CACNA1C-213ENST00000399629 ZNF646O15015 1829 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 F8WEM9 126 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 LHBP01229 141 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 ZNF497Q6ZNH5 498 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 A0A1B0GUT8 65 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 FAM223BA6NKX1 122 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 APOC4P55056 127 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 LINC01590Q5TEZ4 76 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 TCF23Q7RTU1 214 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 LURAP1LQ8IV03 231 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 FAM223AQ8IWN6 122 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 MBNL3Q9NUK0 354 aaKnown RBP10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 IGHV1-3A0A0C4DH29 117 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 APOHP02749 345 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 RUSC1-AS1Q66K80 236 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 FAM131CQ96AQ9 280 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 PMCHL2Q9BQD1 86 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 SEPSECSQ9HD40 501 aaKnown RBP10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 ASCC3Q8N3C0 2202 aaKnown RBP10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 SLC25A15Q9Y619 301 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 BRCA1P38398 1863 aaKnown RBP10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 A0A087X0M5 115 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 A0A1B0GX30 115 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 NAT1P18440 290 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 COL8A2P25067 703 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 DAD1P61803 113 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 Q6AWC8 147 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 Q6ZS92 163 aa10.01□□□□□ -0.81
CACNA1C-213ENST00000399629 LINC01619G3V211 115 aa10□□□□□ -0.81
CACNA1C-213ENST00000399629 CR1LQ2VPA4 569 aa10□□□□□ -0.81
CACNA1C-213ENST00000399629 OR1P1Q8NH06 330 aa10□□□□□ -0.81
CACNA1C-213ENST00000399629 RPL36AP83881 106 aaKnown RBP10□□□□□ -0.81
CACNA1C-213ENST00000399629 SPSB3Q6PJ21 355 aa10□□□□□ -0.81
CACNA1C-213ENST00000399629 RPL36ALQ969Q0 106 aaKnown RBP10□□□□□ -0.81
CACNA1C-213ENST00000399629 A0A1B0GW15 77 aa10□□□□□ -0.81
CACNA1C-213ENST00000399629 TNFSF13O75888 250 aa10□□□□□ -0.81
CACNA1C-213ENST00000399629 MRPL16Q9NX20 251 aaKnown RBP10□□□□□ -0.81
CACNA1C-213ENST00000399629 DEFB130BP0DP73 79 aa10□□□□□ -0.81
CACNA1C-213ENST00000399629 DEFB130AP0DP74 79 aa10□□□□□ -0.81
CACNA1C-213ENST00000399629 C9orf62Q8N4C0 152 aa10□□□□□ -0.81
CACNA1C-213ENST00000399629 F5H768 121 aa10□□□□□ -0.81
CACNA1C-213ENST00000399629 PEF1Q9UBV8 284 aaKnown RBP10□□□□□ -0.81
CACNA1C-213ENST00000399629 GNG5P63218 68 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 TRAV9-2A0A087WT02 112 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 RND3P61587 244 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 ANKRD36A6QL64 1941 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 CACNA1CQ13936 2221 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 GFI1BQ5VTD9 330 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 ZNF660Q6AZW8 331 aaPredicted RBP9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 IL17RELQ6ZVW7 336 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 GTF3AQ92664 365 aaKnown RBP9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 SCO2A0A1W2PP80 73 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 C2orf68Q2NKX9 166 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 RNF182Q8N6D2 247 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 SLC25A38Q96DW6 304 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 MST1P26927 711 aa9.99□□□□□ -0.81
CACNA1C-213ENST00000399629 SLC25A34Q6PIV7 304 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 PSMG3Q9BT73 122 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 IGLV3-32A0A0A0MS00 114 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 TRAV12-3A0A0B4J271 114 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 CRYGSP22914 178 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 NEUROG1Q92886 237 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 JPT2Q9H910 190 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 SCN10AQ9Y5Y9 1956 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 MBD3L4A6NDZ8 208 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 MBD3L3A6NE82 208 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 MBD3L5A6NJ08 208 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 K7ERU9 68 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 PLA2G10O15496 165 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 NDPQ00604 133 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 MDS2Q8NDY4 140 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 MBD3L2Q8NHZ7 208 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 FCN3O75636 299 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 LY6HO94772 140 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 CHD5Q8TDI0 1954 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 PIN1P1O15428 100 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 APOMO95445 188 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 SMIM13P0DJ93 91 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 RPL15P61313 204 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 RPUSD1Q9UJJ7 312 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 CCDC88CQ9P219 2028 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 PPIFP30405 207 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 SAA4P35542 130 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 FOXA3P55318 350 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
CACNA1C-213ENST00000399629 SOD3P08294 240 aa9.97□□□□□ -0.81
CACNA1C-213ENST00000399629 TTC32Q5I0X7 151 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms