RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 COTL1Q14019 142 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 ALKBH2Q6NS38 261 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 PNKDQ8N490 385 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 ARL6IP6Q8N6S5 226 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 OR10W1Q8NGF6 305 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 GRAMD2BQ96HH9 432 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 FAM167A-AS1Q96KT0 104 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 RNF24Q9Y225 148 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 HIGD1CA8MV81 97 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 ITGB1BP1O14713 200 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 PRCDQ00LT1 54 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 KLF5Q13887 457 aaPredicted RBP11.38□□□□□ -0.59
APOB-202ENST00000399256 C17orf58Q2M2W7 97 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 FAM201AQ5SY85 155 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 OR2V2Q96R30 315 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 SRRM5B3KS81 715 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 IGKV3-15P01624 115 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 SSBP2P81877 361 aaPredicted RBP11.38□□□□□ -0.59
APOB-202ENST00000399256 RTL8BQ17RB0 113 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 MPV17L2Q567V2 206 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 GCSAMQ8N6F7 178 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 OR2D3Q8NGH3 330 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 OR2T6Q8NHC8 308 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 PPP1R35Q8TAP8 253 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 ZNRD1Q9P1U0 126 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 PRNDQ9UKY0 176 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 C21orf140B9A014 251 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 IGKV1-16P04430 117 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 CD46P15529 392 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 CA7P43166 264 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 GNG5P63218 68 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 Q6ZT83 130 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 URB1-AS1Q96HZ7 61 aa11.38□□□□□ -0.59
APOB-202ENST00000399256 DSPP15924 2871 aaKnown RBP11.37□□□□□ -0.59
APOB-202ENST00000399256 TEX50A0A1B0GTY4 177 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 OR4C46A6NHA9 309 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 SRRM4A7MD48 611 aaKnown RBP11.37□□□□□ -0.59
APOB-202ENST00000399256 VWC2LB2RUY7 222 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 FOXA3P55318 350 aaPredicted RBP11.37□□□□□ -0.59
APOB-202ENST00000399256 DUX4L9Q6RFH8 374 aaPredicted RBP11.37□□□□□ -0.59
APOB-202ENST00000399256 RASL11AQ6T310 242 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 LINC00173Q6ZV60 143 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 PIP4P1Q86T03 277 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 TMEM70Q9BUB7 260 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 SPRY4Q9C004 299 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 hDV102S1A0JD36 115 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 PEX7O00628 323 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 IGHV3-48P01763 117 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 CR1LQ2VPA4 569 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 ATP1A1-AS1Q5TC04 95 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 VWA1Q6PCB0 445 aa11.37□□□□□ -0.59
APOB-202ENST00000399256 EP300Q09472 2414 aaPredicted RBP11.36□□□□□ -0.59
APOB-202ENST00000399256 UPK2O00526 184 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 NBL1P41271 181 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 TCF24Q7RTU0 167 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 ZNF329Q86UD4 541 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 MOGAT3Q86VF5 341 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 ZNF596Q8TC21 504 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 ZPBPQ9BS86 351 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 C19orf24Q9BVV8 132 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 WASHC3Q9Y3C0 194 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 PCNX2A6NKB5 2137 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 A0A1W2PNU3 283 aaPredicted RBP11.36□□□□□ -0.59
APOB-202ENST00000399256 PLAUP00749 431 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 RNASE2P10153 161 aaKnown RBP11.36□□□□□ -0.59
APOB-202ENST00000399256 ZNF841Q6ZN19 808 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 FAM231DQ6ZW35 169 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 RPH3ALQ9UNE2 315 aa11.36□□□□□ -0.59
APOB-202ENST00000399256 PAXXQ9BUH6 204 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 COX7A2P2O60397 106 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 OR2J3O76001 311 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 CD69Q07108 199 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 MSMPQ1L6U9 139 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 C2orf83Q53S99 150 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 FAM120AOSQ5T036 256 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 DHRS13Q6UX07 377 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 RND1Q92730 232 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 MRPL32Q9BYC8 188 aaKnown RBP11.35□□□□□ -0.59
APOB-202ENST00000399256 MUC6Q6W4X9 2439 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 PSMB11A5LHX3 300 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 ZNF257Q9Y2Q1 563 aa11.35□□□□□ -0.59
APOB-202ENST00000399256 TRAV30A0A087WSZ9 112 aa11.34□□□□□ -0.59
APOB-202ENST00000399256 CBY3A6NI87 242 aa11.34□□□□□ -0.59
APOB-202ENST00000399256 NUDT3O95989 172 aa11.34□□□□□ -0.59
APOB-202ENST00000399256 CGB3P0DN86 165 aa11.34□□□□□ -0.59
APOB-202ENST00000399256 CGB7P0DN87 165 aa11.34□□□□□ -0.59
APOB-202ENST00000399256 LHFPL4Q7Z7J7 247 aa11.34□□□□□ -0.59
APOB-202ENST00000399256 MCRIP2Q9BUT9 160 aaKnown RBP11.34□□□□□ -0.59
APOB-202ENST00000399256 KBTBD11-OT1A0A1B0GTJ5 212 aa11.34□□□□□ -0.59
APOB-202ENST00000399256 SAA1P0DJI8 122 aaPredicted RBP11.34□□□□□ -0.59
APOB-202ENST00000399256 IGHV1-18A0A0C4DH31 117 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 OR2T8A6NH00 312 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 H0Y8G0 127 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 TAX1BP3O14907 124 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 HIST1H1EP10412 219 aaKnown RBP11.33□□□□□ -0.6
APOB-202ENST00000399256 POU2AF1Q16633 256 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 LRRC10Q5BKY1 277 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 HES3Q5TGS1 186 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 SSX8Q7RTT4 187 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms