RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SLC24A4Q8NFF2 622 aa10.62□□□□□ -0.71
HLA-DQB1-202ENST00000399079 OR2K2Q8NGT1 345 aa10.62□□□□□ -0.71
HLA-DQB1-202ENST00000399079 OR1S1Q8NH92 325 aa10.62□□□□□ -0.71
HLA-DQB1-202ENST00000399079 C7orf50Q9BRJ6 194 aaKnown RBP10.62□□□□□ -0.71
HLA-DQB1-202ENST00000399079 RBKSQ9H477 322 aa10.62□□□□□ -0.71
HLA-DQB1-202ENST00000399079 DAZ1Q9NQZ3 744 aaKnown RBP10.62□□□□□ -0.71
HLA-DQB1-202ENST00000399079 GAR1Q9NY12 217 aaKnown RBP10.62□□□□□ -0.71
HLA-DQB1-202ENST00000399079 TECRQ9NZ01 308 aaKnown RBP10.62□□□□□ -0.71
HLA-DQB1-202ENST00000399079 DUXBA0A1W2PPF3 345 aa10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 CORTO00230 105 aa10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 LYRM1O43325 122 aa10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 YIF1AO95070 293 aa10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 OR4E1P0C645 316 aa10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 ELLP55199 621 aaPredicted RBP10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 DHRS2Q13268 280 aa10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 GUCA2BQ16661 112 aa10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 C2orf83Q53S99 150 aa10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 GTSCR1Q86UQ5 136 aa10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 DTD1Q8TEA8 209 aa10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 HIPK2Q9H2X6 1198 aa10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 MRPL27Q9P0M9 148 aaKnown RBP10.61□□□□□ -0.71
HLA-DQB1-202ENST00000399079 PITX3O75364 302 aa10.6□□□□□ -0.71
HLA-DQB1-202ENST00000399079 SCAF4O95104 1147 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB1-202ENST00000399079 TMEM50AO95807 157 aa10.6□□□□□ -0.71
HLA-DQB1-202ENST00000399079 CD7P09564 240 aa10.6□□□□□ -0.71
HLA-DQB1-202ENST00000399079 NPBWR1P48145 328 aa10.6□□□□□ -0.71
HLA-DQB1-202ENST00000399079 UBE2MP61081 183 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB1-202ENST00000399079 RELQ04864 619 aaPredicted RBP10.6□□□□□ -0.71
HLA-DQB1-202ENST00000399079 LINC00299Q6ZSB3 139 aa10.6□□□□□ -0.71
HLA-DQB1-202ENST00000399079 SBSPONQ8IVN8 264 aa10.6□□□□□ -0.71
HLA-DQB1-202ENST00000399079 MARC2Q969Z3 335 aa10.6□□□□□ -0.71
HLA-DQB1-202ENST00000399079 TMED3Q9Y3Q3 217 aa10.6□□□□□ -0.71
HLA-DQB1-202ENST00000399079 MPTX1A8MV57 137 aa10.59□□□□□ -0.71
HLA-DQB1-202ENST00000399079 ADAP1O75689 374 aa10.59□□□□□ -0.71
HLA-DQB1-202ENST00000399079 IFNA10P01566 189 aa10.59□□□□□ -0.71
HLA-DQB1-202ENST00000399079 NPY1RP25929 384 aa10.59□□□□□ -0.71
HLA-DQB1-202ENST00000399079 CD81P60033 236 aa10.59□□□□□ -0.71
HLA-DQB1-202ENST00000399079 C4orf46Q504U0 113 aa10.59□□□□□ -0.71
HLA-DQB1-202ENST00000399079 GGNBP1Q5YKI7 109 aa10.59□□□□□ -0.71
HLA-DQB1-202ENST00000399079 CCDC32Q9BV29 185 aa10.59□□□□□ -0.71
HLA-DQB1-202ENST00000399079 CACFD1Q9UGQ2 172 aa10.59□□□□□ -0.71
HLA-DQB1-202ENST00000399079 IGHV3-49A0A0A0MS15 119 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 PIGBOS1A0A0B4J2F0 54 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 C15orf62A8K5M9 175 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 K7EMT4 169 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 TOMM20LQ6UXN7 152 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 LYG2Q86SG7 212 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 OR4X1Q8NH49 305 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 S100ZQ8WXG8 99 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 OR10C1Q96KK4 312 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 NEURL2Q9BR09 285 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 WFDC10AQ9H1F0 79 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 C20orf85Q9H1P6 137 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 PTTG2Q9NZH5 202 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 IGHV3OR16-13A0A075B7E8 117 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 IGHV3-74A0A0B4J1X5 117 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 CLN5O75503 358 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 IAPPP10997 89 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 SLC25A6P12236 298 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 PRSS54Q6PEW0 395 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 RBPMS2Q6ZRY4 209 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 OR52B4Q8NGK2 314 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 RNASEH2CQ8TDP1 164 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 MAGT1Q9H0U3 335 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 C19orf73Q9NVV2 129 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 PUS1Q9Y606 427 aaKnown RBP eCLIP10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 U3KQ87 197 aa10.58□□□□□ -0.72
HLA-DQB1-202ENST00000399079 TRAV6A0A075B6T7 132 aa10.57□□□□□ -0.72
HLA-DQB1-202ENST00000399079 IGKV1-17P01599 117 aa10.57□□□□□ -0.72
HLA-DQB1-202ENST00000399079 TCRBP04435 133 aa10.57□□□□□ -0.72
HLA-DQB1-202ENST00000399079 RND2P52198 227 aa10.57□□□□□ -0.72
HLA-DQB1-202ENST00000399079 DEFB125Q8N687 156 aa10.57□□□□□ -0.72
HLA-DQB1-202ENST00000399079 SMPXQ9UHP9 88 aa10.57□□□□□ -0.72
HLA-DQB1-202ENST00000399079 TBC1D24Q9ULP9 559 aa10.57□□□□□ -0.72
HLA-DQB1-202ENST00000399079 TRAV14DV4A0A0A6YYC5 116 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 IGHV7-4-1A0A0J9YVY3 117 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 RPS10-NUDT3A0A1W2PQS6 291 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 A8MZ25 164 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 NHLRC4P0CG21 123 aaPredicted RBP10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 TIGITQ495A1 244 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 ZNF600Q6ZNG1 722 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 TMEM116Q8NCL8 245 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 COQ8AQ8NI60 647 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 RNF2Q99496 336 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 RHPN1-AS1Q9BWJ2 59 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 TUBA4BQ9H853 241 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 ZFAND3Q9H8U3 227 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 NUDT15Q9NV35 164 aa10.56□□□□□ -0.72
HLA-DQB1-202ENST00000399079 OR11H12B2RN74 326 aa10.55□□□□□ -0.72
HLA-DQB1-202ENST00000399079 FAM90A26D6RGX4 464 aa10.55□□□□□ -0.72
HLA-DQB1-202ENST00000399079 CHEK1O14757 476 aa10.55□□□□□ -0.72
HLA-DQB1-202ENST00000399079 APOHP02749 345 aaPredicted RBP10.55□□□□□ -0.72
HLA-DQB1-202ENST00000399079 IFNA4P05014 189 aa10.55□□□□□ -0.72
HLA-DQB1-202ENST00000399079 IGLC1P0CG04 106 aa10.55□□□□□ -0.72
HLA-DQB1-202ENST00000399079 SLC25A4P12235 298 aa10.55□□□□□ -0.72
HLA-DQB1-202ENST00000399079 NOXA1Q86UR1 476 aa10.55□□□□□ -0.72
HLA-DQB1-202ENST00000399079 NPIPB3Q92617 1050 aa10.55□□□□□ -0.72
HLA-DQB1-202ENST00000399079 ACY3Q96HD9 319 aa10.55□□□□□ -0.72
HLA-DQB1-202ENST00000399079 BATF3Q9NR55 127 aa10.55□□□□□ -0.72
HLA-DQB1-202ENST00000399079 HUWE1Q7Z6Z7 4374 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms