RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 IMMP2LQ96T52 175 aa11.85□□□□□ -0.51
PCDHA11-201ENST00000398640 RCC1LQ96I51 464 aaKnown RBP11.85□□□□□ -0.51
PCDHA11-201ENST00000398640 SLC25A16P16260 332 aa11.85□□□□□ -0.51
PCDHA11-201ENST00000398640 TM2D1Q9BX74 207 aa11.85□□□□□ -0.51
PCDHA11-201ENST00000398640 PGPEP1Q9NXJ5 209 aa11.85□□□□□ -0.51
PCDHA11-201ENST00000398640 UQCR10Q9UDW1 63 aa11.85□□□□□ -0.51
PCDHA11-201ENST00000398640 TIMM23O14925 209 aa11.85□□□□□ -0.51
PCDHA11-201ENST00000398640 RIPPLY3P57055 190 aa11.85□□□□□ -0.51
PCDHA11-201ENST00000398640 TRAV14DV4A0A0A6YYC5 116 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 GPX4P36969 197 aaPredicted RBP11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 IGHV1-46P01743 117 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 RNF223E7ERA6 249 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 WISP1O95388 367 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 PRB1P04280 392 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 FAM209BQ5JX69 171 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 GFI1BQ5VTD9 330 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 SEC16AO15027 2179 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 OR11H12B2RN74 326 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 FBLN7Q53RD9 439 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 KIR3DL3Q8N743 410 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 OR11H1Q8NG94 326 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 OR11H2Q8NH07 326 aa11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 SOX21Q9Y651 276 aaPredicted RBP11.84□□□□□ -0.51
PCDHA11-201ENST00000398640 FMC1Q96HJ9 113 aa11.83□□□□□ -0.51
PCDHA11-201ENST00000398640 PQLC2LA1A4F0 135 aa11.83□□□□□ -0.52
PCDHA11-201ENST00000398640 TSPAN13O95857 204 aa11.83□□□□□ -0.52
PCDHA11-201ENST00000398640 RTBDNQ9BSG5 229 aaPredicted RBP11.83□□□□□ -0.52
PCDHA11-201ENST00000398640 FAM90A1Q86YD7 464 aa11.83□□□□□ -0.52
PCDHA11-201ENST00000398640 FER1L6-AS1Q8NA97 138 aa11.83□□□□□ -0.52
PCDHA11-201ENST00000398640 ST6GALNAC6Q969X2 333 aa11.83□□□□□ -0.52
PCDHA11-201ENST00000398640 MRPL16Q9NX20 251 aaKnown RBP11.83□□□□□ -0.52
PCDHA11-201ENST00000398640 LEPP41159 167 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 OR9G4Q8NGQ1 327 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 PSMG3Q9BT73 122 aaPredicted RBP11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 CACNA1EQ15878 2313 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 B4DSR2 109 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 RAMP3O60896 148 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 Q5PR19 223 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 TMEM42Q69YG0 159 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 RPP21Q9H633 154 aaKnown RBP11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 TRBV9A0A0B4J1U6 114 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 A6NNC1 897 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 PSCAO43653 123 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 IGF2-ASQ6U949 168 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 LINC00114Q6XXX2 140 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 BEND2Q8NDZ0 799 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 WBP1Q96G27 269 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 NUDT11Q96G61 164 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 LYZL4Q96KX0 146 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 H3BRM9 83 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 PPIFP30405 207 aaKnown RBP11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 RALGAPA1Q6GYQ0 2036 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 LY6HO94772 140 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 CNTFRP26992 372 aa11.82□□□□□ -0.52
PCDHA11-201ENST00000398640 CLPSP04118 112 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 OR10J3Q5JRS4 329 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 RNASEH2CQ8TDP1 164 aaKnown RBP11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 TRBV7-9A0A0J9YWB2 115 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 TMEM250H0YL14 139 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 K7ERU9 68 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 PAX1P15863 534 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 HOXA5P20719 270 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 PSMG4Q5JS54 123 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 JKAMPQ9P055 326 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 ASCL4Q6XD76 172 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 GTF3AQ92664 365 aaKnown RBP11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 SLC25A15Q9Y619 301 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 AHCTF1Q8WYP5 2266 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 A0A1B0GUT8 65 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 H3BUX3 64 aa11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 C11orf68Q9H3H3 251 aaKnown RBP11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 SNRNP200O75643 2136 aaKnown RBP11.81□□□□□ -0.52
PCDHA11-201ENST00000398640 SMIM13P0DJ93 91 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 FXYD7P58549 80 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 IFITM2Q01629 132 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 TRAV41A0A0B4J266 112 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 Q96MF0 132 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 IL36BQ9NZH7 164 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 DOCK4Q8N1I0 1966 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 UPK2O00526 184 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 MORN2Q502X0 79 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 ZNF525Q8N782 197 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 ZNF815PA8K554 130 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 TMEM50AO95807 157 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 TTC32Q5I0X7 151 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 KLHL30-AS1Q8NEE0 82 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 GGACTQ9BVM4 153 aa11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 PARD6GQ9BYG4 376 aaPredicted RBP11.8□□□□□ -0.52
PCDHA11-201ENST00000398640 SCN8AQ9UQD0 1980 aa11.79□□□□□ -0.52
PCDHA11-201ENST00000398640 CD8AP01732 235 aa11.79□□□□□ -0.52
PCDHA11-201ENST00000398640 CRYGSP22914 178 aa11.79□□□□□ -0.52
PCDHA11-201ENST00000398640 PRR31Q5SQ13 230 aa11.79□□□□□ -0.52
PCDHA11-201ENST00000398640 SAMD13Q5VXD3 122 aa11.79□□□□□ -0.52
PCDHA11-201ENST00000398640 FGFBP3Q8TAT2 258 aa11.79□□□□□ -0.52
PCDHA11-201ENST00000398640 GBF1Q92538 1859 aa11.79□□□□□ -0.52
PCDHA11-201ENST00000398640 ZNF318Q5VUA4 2279 aa11.79□□□□□ -0.52
PCDHA11-201ENST00000398640 IGKV1D-13A0A0B4J2D9 117 aa11.79□□□□□ -0.52
PCDHA11-201ENST00000398640 CD55P08174 381 aa11.79□□□□□ -0.52
PCDHA11-201ENST00000398640 IGKV1-13P0DP09 117 aa11.79□□□□□ -0.52
PCDHA11-201ENST00000398640 C14orf144Q96I85 54 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms