RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 PRR32B1ATL7 298 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 IGHV3-11P01762 117 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 OR9G9P0C7N8 305 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 PPIFP30405 207 aaKnown RBP9.84□□□□□ -0.83
TMF1-201ENST00000398559 WBP1Q96G27 269 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 GFI1Q99684 422 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 ASCL2Q99929 193 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 J3QRE1 110 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 IGKCP01834 107 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 EFNB3Q15768 340 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 CFAP161Q6P656 301 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 HIST3H2BBQ8N257 126 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 TRAV8-4A0A0B4J246 113 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 IFI27P40305 119 aaPredicted RBP9.84□□□□□ -0.83
TMF1-201ENST00000398559 COL4A5P29400 1685 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 SMAD7O15105 426 aaKnown RBP9.84□□□□□ -0.83
TMF1-201ENST00000398559 SIGMAR1Q99720 223 aa9.84□□□□□ -0.83
TMF1-201ENST00000398559 UMODP07911 640 aa9.83□□□□□ -0.84
TMF1-201ENST00000398559 LINC00271P0C7V0 271 aa9.83□□□□□ -0.84
TMF1-201ENST00000398559 PRB4P10163 310 aaPredicted RBP9.83□□□□□ -0.84
TMF1-201ENST00000398559 CHCHD1Q96BP2 118 aaKnown RBP9.83□□□□□ -0.84
TMF1-201ENST00000398559 CHD5Q8TDI0 1954 aa9.83□□□□□ -0.84
TMF1-201ENST00000398559 PSG8Q9UQ74 426 aa9.83□□□□□ -0.84
TMF1-201ENST00000398559 PAQR4Q8N4S7 273 aaPredicted RBP9.83□□□□□ -0.84
TMF1-201ENST00000398559 COLQQ9Y215 455 aaPredicted RBP9.83□□□□□ -0.84
TMF1-201ENST00000398559 IGKV1D-8A0A087WSZ0 117 aa9.83□□□□□ -0.84
TMF1-201ENST00000398559 NBR2O15453 112 aa9.83□□□□□ -0.84
TMF1-201ENST00000398559 TEX38Q6PEX7 206 aa9.83□□□□□ -0.84
TMF1-201ENST00000398559 PDCD11Q14690 1871 aaKnown RBP9.83□□□□□ -0.84
TMF1-201ENST00000398559 LHFPL4Q7Z7J7 247 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 RNF125Q96EQ8 232 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 TRGV2A0A075B6R0 118 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 CKS1BP61024 79 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 PVRIGQ6DKI7 326 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 A0A1W2PRE2 83 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 ZNF815PA8K554 130 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 FOXL1Q12952 345 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 RNF182Q8N6D2 247 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 NEU4Q8WWR8 484 aaPredicted RBP9.82□□□□□ -0.84
TMF1-201ENST00000398559 CD5P06127 495 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 CCL1P22362 96 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 NXT2Q9NPJ8 142 aaKnown RBP9.82□□□□□ -0.84
TMF1-201ENST00000398559 RP1L1Q8IWN7 2480 aaPredicted RBP9.82□□□□□ -0.84
TMF1-201ENST00000398559 COLCA2A8K830 154 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 LYPD3O95274 346 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 AMBPP02760 352 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 MPZP25189 248 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 ID3Q02535 119 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 SAMD5Q5TGI4 173 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 TMEM42Q69YG0 159 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 C11orf68Q9H3H3 251 aaKnown RBP9.82□□□□□ -0.84
TMF1-201ENST00000398559 FBLN5Q9UBX5 448 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 C17orf100A8MU93 164 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 ZIC4Q8N9L1 334 aa9.82□□□□□ -0.84
TMF1-201ENST00000398559 PSME4Q14997 1843 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 MALP21145 153 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 ZNF124Q15973 351 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 OR2K2Q8NGT1 345 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 SLC50A1Q9BRV3 221 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 TRAV5A0A0B4J249 113 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 TSKUQ8WUA8 353 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 IGHV3-64A0A075B6Q5 118 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 GZMBP10144 247 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 CD24P25063 80 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 C9orf106Q8NAJ2 232 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 CYSLTR1Q9Y271 337 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 SEC16AO15027 2179 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 A0A1W2PRX2 142 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 TNFSF13O75888 250 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 FAM89BQ8N5H3 189 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 ZNF319Q9P2F9 582 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 LHX2P50458 406 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 NEUROG3Q9Y4Z2 214 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 SLC25A15Q9Y619 301 aa9.81□□□□□ -0.84
TMF1-201ENST00000398559 SNRNP200O75643 2136 aaKnown RBP9.81□□□□□ -0.84
TMF1-201ENST00000398559 HTN3P15516 51 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 TIMP3P35625 211 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 IFI27L1Q96BM0 104 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 YAE1D1Q9NRH1 226 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 ERVK11-1P61568 191 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 ZNF479Q96JC4 524 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 TRAV21A0A0B4J279 112 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 PRCDQ00LT1 54 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 HSD52Q0P140 79 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 TMEM242Q9NWH2 141 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 CEACAM1P13688 526 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 ORMDL2Q53FV1 153 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 PRR31Q5SQ13 230 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 COLCA1Q6ZS62 124 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 GLRX5Q86SX6 157 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 CRIM1Q9NZV1 1036 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 SLC25A20O43772 301 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 CD28P10747 220 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 MRPS18CQ9Y3D5 142 aaKnown RBP9.8□□□□□ -0.84
TMF1-201ENST00000398559 SBF2Q86WG5 1849 aa9.8□□□□□ -0.84
TMF1-201ENST00000398559 DUTP33316 252 aaKnown RBP9.79□□□□□ -0.84
TMF1-201ENST00000398559 SLC25A2Q9BXI2 301 aa9.79□□□□□ -0.84
TMF1-201ENST00000398559 SEPSECSQ9HD40 501 aaKnown RBP9.79□□□□□ -0.84
TMF1-201ENST00000398559 PLXNA1Q9UIW2 1896 aa9.79□□□□□ -0.84
TMF1-201ENST00000398559 A8MWV9 139 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms