RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 AREGP15514 252 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 SNRPD3P62318 126 aaKnown RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 IBA57Q5T440 356 aaKnown RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 VMO1Q7Z5L0 202 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 C7orf69Q9H7B7 122 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 GNB4Q9HAV0 340 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 ZMAT5Q9UDW3 170 aaKnown RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 C17orf98A8MV24 154 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 IL15RAQ13261 267 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 CIARTQ8N365 385 aaPredicted RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 CEBPDP49716 269 aaPredicted RBP2.78□□□□□ -1.96
VPS13C-203ENST00000395896 C5orf64Q2M2E5 130 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF585BQ52M93 769 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF506Q5JVG8 444 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 CD177Q8N6Q3 437 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF525Q8N782 197 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 CDC42EP3Q9UKI2 254 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 A0A087X0M5 115 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 A0A1B0GX30 115 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 ATXN7O15265 892 aaPredicted RBP2.78□□□□□ -1.96
VPS13C-203ENST00000395896 IGHV3-7P01780 117 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 REG1BP48304 166 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 RND2P52198 227 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 RIGQ13278 110 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 FXYD3Q14802 87 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 AARDQ4LEZ3 155 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 Q6ZR03 302 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 TRGV9Q99603 122 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 A0A0U1RQK1 487 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 A6NNC1 897 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 C9JCJ5 164 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 RASL11AQ6T310 242 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF600Q6ZNG1 722 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 OR5AU1Q8NGC0 362 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 JKAMPQ9P055 326 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 RABAC1Q9UI14 185 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF320A2RRD8 509 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 E7EQL1 145 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 FCN1O00602 326 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 PMCHP20382 165 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 TSPOP30536 169 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 CCKARP32238 428 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 NHLRC2Q8NBF2 726 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 PARLQ9H300 379 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 YTHDF2Q9Y5A9 579 aaKnown RBP2.78□□□□□ -1.96
VPS13C-203ENST00000395896 TRBV7-1A0A0A6YYK4 115 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 OR10J1P30954 320 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 RPL39P5Q59GN2 51 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 ATG101Q9BSB4 218 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 IL36RNQ9UBH0 155 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 RRHO14718 337 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 C1QL1O75973 258 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 CCL20P78556 96 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 C9orf152Q5JTZ5 239 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 CENPVQ7Z7K6 275 aaPredicted RBP2.78□□□□□ -1.96
VPS13C-203ENST00000395896 LRP11Q86VZ4 500 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 DMRTA2Q96SC8 542 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 TMPRSS5Q9H3S3 457 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 NARFLQ9H6Q4 476 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 CRIM1Q9NZV1 1036 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 TRAV39A0A0B4J263 110 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 PRSS8Q16651 343 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 TREML4Q6UXN2 200 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 TCF24Q7RTU0 167 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 FMC1Q96HJ9 113 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 IGKV1D-33P01593 117 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 IGKV1-33P01594 117 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 STAG3L2P0CL84 134 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 STAG3L3P0CL85 134 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 RPEL1Q2QD12 228 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 C8orf46Q8TAG6 207 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 TRBV24-1A0A075B6N3 115 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 ARL14EPLP0DKL9 152 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 RUNX1Q01196 453 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 Q5BKY6 102 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 SIGLECL1Q8N7X8 197 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 NPIPB3Q92617 1050 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 NAT8BQ9UHF3 227 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 PAGE4O60829 102 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 OR5I1Q13606 314 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 FAM24BQ8N5W8 94 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 SPOCK3Q9BQ16 436 aa2.78□□□□□ -1.96
VPS13C-203ENST00000395896 MSGN1A6NI15 193 aa2.78□□□□□ -1.97
VPS13C-203ENST00000395896 H0YIZ8 118 aa2.78□□□□□ -1.97
VPS13C-203ENST00000395896 IGKV1-5P01602 117 aa2.78□□□□□ -1.97
VPS13C-203ENST00000395896 LOXL3P58215 753 aa2.78□□□□□ -1.97
VPS13C-203ENST00000395896 LYZP61626 148 aa2.78□□□□□ -1.97
VPS13C-203ENST00000395896 RPL30P62888 115 aaKnown RBP2.78□□□□□ -1.97
VPS13C-203ENST00000395896 OR11H6Q8NGC7 330 aa2.78□□□□□ -1.97
VPS13C-203ENST00000395896 SIGLEC9Q9Y336 463 aa2.78□□□□□ -1.97
VPS13C-203ENST00000395896 H0YJW9 148 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 UNQ5815/PRO19632Q6UWF5 114 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF833PQ6ZTB9 187 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 DMRTC2Q8IXT2 367 aaPredicted RBP2.77□□□□□ -1.97
VPS13C-203ENST00000395896 SLC25A33Q9BSK2 321 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 C20orf24Q9BUV8 137 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 HIF1ANQ9NWT6 349 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 FAM157AC9JC47 383 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 C15orf65H3BRN8 121 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 TDGF1P3P51864 188 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms