RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 C19orf54Q5BKX5 351 aa16.01■□□□□ 0.15
VCPKMT-202ENST00000395860 RNF141Q8WVD5 230 aa16.01■□□□□ 0.15
VCPKMT-202ENST00000395860 MGST2Q99735 147 aa16.01■□□□□ 0.15
VCPKMT-202ENST00000395860 RND2P52198 227 aa16■□□□□ 0.15
VCPKMT-202ENST00000395860 RAB31Q13636 194 aa16■□□□□ 0.15
VCPKMT-202ENST00000395860 ZNF418Q8TF45 676 aaPredicted RBP16■□□□□ 0.15
VCPKMT-202ENST00000395860 PCNPQ8WW12 178 aaKnown RBP16■□□□□ 0.15
VCPKMT-202ENST00000395860 NPIPB3Q92617 1050 aa16■□□□□ 0.15
VCPKMT-202ENST00000395860 PLA2G2EQ9NZK7 142 aa16■□□□□ 0.15
VCPKMT-202ENST00000395860 MRPL36Q9P0J6 103 aaKnown RBP16■□□□□ 0.15
VCPKMT-202ENST00000395860 INAFM1C9JVW0 142 aa16■□□□□ 0.15
VCPKMT-202ENST00000395860 K7EIM0 57 aa16■□□□□ 0.15
VCPKMT-202ENST00000395860 OR2J3O76001 311 aa16■□□□□ 0.15
VCPKMT-202ENST00000395860 CAMLGP49069 296 aa16■□□□□ 0.15
VCPKMT-202ENST00000395860 SULT1A2P50226 295 aa16■□□□□ 0.15
VCPKMT-202ENST00000395860 ACSM6Q6P461 480 aa16■□□□□ 0.15
VCPKMT-202ENST00000395860 CENPVQ7Z7K6 275 aaPredicted RBP16■□□□□ 0.15
VCPKMT-202ENST00000395860 AGPAT2O15120 278 aa15.99■□□□□ 0.15
VCPKMT-202ENST00000395860 SERF2P84101 59 aa15.99■□□□□ 0.15
VCPKMT-202ENST00000395860 TMEM95Q3KNT9 176 aa15.99■□□□□ 0.15
VCPKMT-202ENST00000395860 ESM1Q9NQ30 184 aa15.99■□□□□ 0.15
VCPKMT-202ENST00000395860 FBXL7Q9UJT9 491 aa15.99■□□□□ 0.15
VCPKMT-202ENST00000395860 ZNF580Q9UK33 172 aa15.99■□□□□ 0.15
VCPKMT-202ENST00000395860 IGKV1OR2-108A0A075B7D4 117 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 SOX15O60248 233 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 FAM157CP0CG43 387 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 AKR1C8PQ5T2L2 129 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 TMEM116Q8NCL8 245 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 LRRC20Q8TCA0 184 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 GGTLC1Q9BX51 225 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 ZNF702PQ9H963 129 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 UMAD1C9J7I0 102 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 NDUFB8O95169 186 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 KLK9Q2XQG4 91 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 MS4A10Q96PG2 267 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 KCNIP2Q9NS61 270 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 KLK9Q9UKQ9 250 aa15.98■□□□□ 0.15
VCPKMT-202ENST00000395860 HIVEP2P31629 2446 aa15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 ZFP92A6NM28 416 aa15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 CYSRT1A8MQ03 144 aa15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 CLDN34H7C241 214 aa15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 PPIFP30405 207 aaKnown RBP15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 OR10J1P30954 320 aa15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 RAB5CP51148 216 aa15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 ELLP55199 621 aaPredicted RBP15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 RHOGP84095 191 aa15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 DEFA5Q01523 94 aa15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 CLLU1Q5K131 121 aa15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 THAP8Q8NA92 274 aa15.97■□□□□ 0.15
VCPKMT-202ENST00000395860 TRBV9A0A0B4J1U6 114 aa15.96■□□□□ 0.15
VCPKMT-202ENST00000395860 ZNF705EA8MWA4 302 aaPredicted RBP15.96■□□□□ 0.15
VCPKMT-202ENST00000395860 NMBP08949 121 aa15.96■□□□□ 0.15
VCPKMT-202ENST00000395860 FFAR4Q5NUL3 377 aa15.96■□□□□ 0.15
VCPKMT-202ENST00000395860 OR4X1Q8NH49 305 aa15.96■□□□□ 0.15
VCPKMT-202ENST00000395860 PXMP4Q9Y6I8 212 aa15.96■□□□□ 0.15
VCPKMT-202ENST00000395860 S4R3C0 116 aa15.96■□□□□ 0.15
VCPKMT-202ENST00000395860 FAM181BA6NEQ2 426 aa15.95■□□□□ 0.14
VCPKMT-202ENST00000395860 MFSD2BA6NFX1 497 aa15.95■□□□□ 0.14
VCPKMT-202ENST00000395860 MIC13Q5XKP0 118 aa15.95■□□□□ 0.14
VCPKMT-202ENST00000395860 NECAP1Q8NC96 275 aa15.95■□□□□ 0.14
VCPKMT-202ENST00000395860 ANK3Q12955 4377 aaKnown RBP15.95■□□□□ 0.14
VCPKMT-202ENST00000395860 H3BUA1 57 aa15.95■□□□□ 0.14
VCPKMT-202ENST00000395860 MFAP4P55083 255 aa15.95■□□□□ 0.14
VCPKMT-202ENST00000395860 HILS1P60008 231 aa15.95■□□□□ 0.14
VCPKMT-202ENST00000395860 C15orf32Q32M92 178 aa15.95■□□□□ 0.14
VCPKMT-202ENST00000395860 VSIRQ9H7M9 311 aa15.95■□□□□ 0.14
VCPKMT-202ENST00000395860 C21orf62Q9NYP8 219 aa15.95■□□□□ 0.14
VCPKMT-202ENST00000395860 IGKV1D-37A0A075B6S9 117 aa15.94■□□□□ 0.14
VCPKMT-202ENST00000395860 TCRBV4S1A1TA0A5B7 111 aa15.94■□□□□ 0.14
VCPKMT-202ENST00000395860 CLN5O75503 358 aa15.94■□□□□ 0.14
VCPKMT-202ENST00000395860 TRGV3P03979 118 aa15.94■□□□□ 0.14
VCPKMT-202ENST00000395860 RPL29P47914 159 aaKnown RBP15.94■□□□□ 0.14
VCPKMT-202ENST00000395860 CFHR3Q02985 330 aa15.94■□□□□ 0.14
VCPKMT-202ENST00000395860 CYP2G1PQ6ZSU1 146 aa15.94■□□□□ 0.14
VCPKMT-202ENST00000395860 Q8N2B8 174 aa15.94■□□□□ 0.14
VCPKMT-202ENST00000395860 STPG3Q8N7X2 389 aa15.94■□□□□ 0.14
VCPKMT-202ENST00000395860 VN1R17PQ8TDU5 208 aa15.94■□□□□ 0.14
VCPKMT-202ENST00000395860 SLC45A2Q9UMX9 530 aa15.94■□□□□ 0.14
VCPKMT-202ENST00000395860 TSPAN15O95858 294 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 MBP02144 154 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 NPBWR1P48145 328 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 FHITP49789 147 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 B2MP61769 119 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 TMEM41BQ5BJD5 291 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 Q6ZRG5 221 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 BPIFCQ8NFQ6 507 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 FAM213BQ8TBF2 198 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 SAT2Q96F10 170 aaPredicted RBP15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 CXorf58Q96LI9 332 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 JMJD8Q96S16 334 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 TRGV9Q99603 122 aa15.93■□□□□ 0.14
VCPKMT-202ENST00000395860 FAM223BA6NKX1 122 aa15.92■□□□□ 0.14
VCPKMT-202ENST00000395860 BRI3O95415 125 aa15.92■□□□□ 0.14
VCPKMT-202ENST00000395860 IGHV3-23P01764 117 aa15.92■□□□□ 0.14
VCPKMT-202ENST00000395860 RNASE1P07998 156 aaKnown RBP15.92■□□□□ 0.14
VCPKMT-202ENST00000395860 PF4V1P10720 104 aa15.92■□□□□ 0.14
VCPKMT-202ENST00000395860 TPPP2P59282 170 aa15.92■□□□□ 0.14
VCPKMT-202ENST00000395860 BLOC1S1P78537 153 aa15.92■□□□□ 0.14
VCPKMT-202ENST00000395860 ZNF90Q03938 601 aa15.92■□□□□ 0.14
VCPKMT-202ENST00000395860 Q56UQ5 140 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms