RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 C5orf17Q8NAS9 161 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 HSD17B10Q99714 261 aaKnown RBP4.74□□□□□ -1.65
RFFL-202ENST00000394597 CITED1Q99966 193 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 SLC25A10Q9UBX3 287 aaPredicted RBP4.74□□□□□ -1.65
RFFL-202ENST00000394597 WNK2Q9Y3S1 2297 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 DOPEY1Q5JWR5 2465 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 ARHGAP21Q5T5U3 1957 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 SLC25A17O43808 307 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 PRSS1P07477 247 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 UBE2L3P68036 154 aaKnown RBP4.73□□□□□ -1.65
RFFL-202ENST00000394597 LY6DQ14210 128 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 MYO7BQ6PIF6 2116 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 ACP7Q6ZNF0 438 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 TMEM144Q7Z5S9 345 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 A0A0C4DFX4 3053 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 PCNX1Q96RV3 2341 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 WNT9BO14905 357 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 GPR6P46095 362 aaPredicted RBP4.73□□□□□ -1.65
RFFL-202ENST00000394597 SUB1P53999 127 aaKnown RBP eCLIP4.73□□□□□ -1.65
RFFL-202ENST00000394597 LYRM7Q5U5X0 104 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 MIC13Q5XKP0 118 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 SLC35E4Q6ICL7 350 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 COLCA1Q6ZS62 124 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 VSTM2AQ8TAG5 236 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 PYGO2Q9BRQ0 406 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 COMMD5Q9GZQ3 224 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 ONECUT1Q9UBC0 465 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 TSSC4Q9Y5U2 329 aaPredicted RBP4.73□□□□□ -1.65
RFFL-202ENST00000394597 LOC107984156A0A0G2JMH3 177 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 A0A0G2JNJ9 132 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 A0A1W2PS18 150 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 FAM181BA6NEQ2 426 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 MMP23AO75900 390 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 CT45A6P0DMU7 189 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 CT45A5P0DMU8 189 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 CT45A7P0DMV0 189 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 IGLL1P15814 213 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 RSPO1Q2MKA7 263 aaPredicted RBP4.73□□□□□ -1.65
RFFL-202ENST00000394597 CT45A1Q5HYN5 189 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 ZNF474Q6S9Z5 364 aaPredicted RBP4.73□□□□□ -1.65
RFFL-202ENST00000394597 ARL17AQ8IVW1 177 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 FAM169BQ8N8A8 192 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 WDR31Q8NA23 367 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 CT45A3Q8NHU0 189 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 NPCDR1Q9BY65 106 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 Q9UFV3 132 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 TMEM56-RWDD3S4R434 201 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 IGKV1-27A0A075B6S5 117 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 IGKV1-12A0A0C4DH73 117 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 IGLC7A0M8Q6 106 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 CLDN14O95500 239 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 IGKV1D-12P01611 117 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 SLC25A5P05141 298 aaKnown RBP4.73□□□□□ -1.65
RFFL-202ENST00000394597 DEFA4P12838 97 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 RPS20P60866 119 aaKnown RBP4.73□□□□□ -1.65
RFFL-202ENST00000394597 GNB1P62873 340 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 TFF3Q07654 80 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 Q0VG73 95 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 MBNL2Q5VZF2 373 aaKnown RBP4.73□□□□□ -1.65
RFFL-202ENST00000394597 MOB3BQ86TA1 216 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 FGFRL1Q8N441 504 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 OR1L1Q8NH94 360 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 PLPPR1Q8TBJ4 325 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 WFDC12Q8WWY7 111 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 RNF166Q96A37 237 aaPredicted RBP4.73□□□□□ -1.65
RFFL-202ENST00000394597 RNASE7Q9H1E1 156 aaKnown RBP4.73□□□□□ -1.65
RFFL-202ENST00000394597 TMEM140Q9NV12 185 aa4.73□□□□□ -1.65
RFFL-202ENST00000394597 A0A1B0GW15 77 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 COX7A2P2O60397 106 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 TOMM40O96008 361 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 P01737 135 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 RPL8P62917 257 aaKnown RBP4.72□□□□□ -1.65
RFFL-202ENST00000394597 QRFPP83859 136 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 ERHP84090 104 aaKnown RBP4.72□□□□□ -1.65
RFFL-202ENST00000394597 SAMD5Q5TGI4 173 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 STXBP6Q8NFX7 210 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 YPEL4Q96NS1 127 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 ZNF355PQ9NSJ1 428 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 CYSLTR1Q9Y271 337 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 FAM208BQ5VWN6 2430 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 KBTBD11-OT1A0A1B0GTJ5 212 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 ZG16O60844 167 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 MPDU1O75352 247 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 IGKV3-15P01624 115 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 CT45A10P0DMU9 189 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 LMO1P25800 156 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 ARL16Q0P5N6 197 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 TNXAQ16473 311 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 RNF144BQ7Z419 303 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 FAM90A1Q86YD7 464 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 GCSAMQ8N6F7 178 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 TSKUQ8WUA8 353 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 LSM10Q969L4 123 aaKnown RBP4.72□□□□□ -1.65
RFFL-202ENST00000394597 FER1L5A0AVI2 2057 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 TRAV26-1A0A087WT03 109 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 C17orf100A8MU93 164 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 A8MWL6 223 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 VMA21Q3ZAQ7 101 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 TEX29Q8N6K0 151 aa4.72□□□□□ -1.65
RFFL-202ENST00000394597 SSBP4Q9BWG4 385 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms