RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 FAM120AOSQ5T036 256 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 CTRB2Q6GPI1 263 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 ETFRF1Q6IPR1 90 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 IGHV1-69DA0A0B4J2H0 117 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 CNIH1O95406 144 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 IGHV1-69P01742 117 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 BRS3P32247 399 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 SOHLH1Q5JUK2 328 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 RUSC1-AS1Q66K80 236 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 ZNF562Q6V9R5 426 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 RBMS3Q6XE24 437 aaKnown RBP11.86□□□□□ -0.51
CCT4-201ENST00000394440 SLC35E3Q7Z769 313 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 ABHD5Q8WTS1 349 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 NPIPB3Q92617 1050 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 SEPSECSQ9HD40 501 aaKnown RBP11.86□□□□□ -0.51
CCT4-201ENST00000394440 SVEP1Q4LDE5 3571 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 CSMD2Q7Z408 3487 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 FAM106CPP0CH98 169 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 GATA2P23769 480 aaPredicted RBP11.86□□□□□ -0.51
CCT4-201ENST00000394440 PSMB3P49720 205 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 NDPQ00604 133 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 CYP2G1PQ6ZSU1 146 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 Q8N9W7 124 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 MISP3Q96FF7 219 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 MANBALQ9NQG1 85 aa11.86□□□□□ -0.51
CCT4-201ENST00000394440 TRAV40A0A0B4J280 105 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 PSMB11A5LHX3 300 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 FAM74A7A6NL05 159 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 NDUFS6O75380 124 aaKnown RBP11.85□□□□□ -0.51
CCT4-201ENST00000394440 IGHV3-48P01763 117 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 TAGLN2P37802 199 aaKnown RBP11.85□□□□□ -0.51
CCT4-201ENST00000394440 RND2P52198 227 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 RHOBP62745 196 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 CX3CL1P78423 397 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 FAM74A3Q4VXF1 159 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 FAM90A2PQ658T7 463 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 TMEM116Q8NCL8 245 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 SLC25A33Q9BSK2 321 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 TCRBV4S1A1TA0A5B7 111 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 CD81P60033 236 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 MEF2BQ02080 365 aaPredicted RBP11.85□□□□□ -0.51
CCT4-201ENST00000394440 ASPHD1Q5U4P2 390 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 SPATA31B1PQ5VZV4 182 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 GATAD1Q8WUU5 269 aa11.85□□□□□ -0.51
CCT4-201ENST00000394440 FAM103A1Q9BTL3 118 aaKnown RBP11.85□□□□□ -0.51
CCT4-201ENST00000394440 ABCA1O95477 2261 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 NCBP2LA6PVI3 153 aaKnown RBP11.84□□□□□ -0.51
CCT4-201ENST00000394440 B4DSR2 109 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 SPNS3Q6ZMD2 512 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 WNT10AQ9GZT5 417 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 UNC79Q9P2D8 2635 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 PRSS47A8MTI9 375 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 I3L2K1 104 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 MT-CO2P00403 227 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 OR5G3P0C626 314 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 ARL14EPLP0DKL9 152 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 ARPC1AQ92747 370 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 C19orf24Q9BVV8 132 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 C1RLQ9NZP8 487 aa11.84□□□□□ -0.51
CCT4-201ENST00000394440 POLQO75417 2590 aa11.83□□□□□ -0.52
CCT4-201ENST00000394440 HLA-DRB1P01911 266 aa11.83□□□□□ -0.52
CCT4-201ENST00000394440 CR1P17927 2039 aa11.83□□□□□ -0.52
CCT4-201ENST00000394440 IGHV7-81A0A0B4J1V7 117 aa11.83□□□□□ -0.52
CCT4-201ENST00000394440 NPIPB5A8MRT5 1133 aa11.83□□□□□ -0.52
CCT4-201ENST00000394440 CXorf1O96002 111 aa11.83□□□□□ -0.52
CCT4-201ENST00000394440 AWAT1Q58HT5 328 aa11.83□□□□□ -0.52
CCT4-201ENST00000394440 FAM78BQ5VT40 261 aa11.83□□□□□ -0.52
CCT4-201ENST00000394440 TMEM37Q8WXS4 190 aa11.83□□□□□ -0.52
CCT4-201ENST00000394440 BEX4Q9NWD9 120 aaPredicted RBP11.83□□□□□ -0.52
CCT4-201ENST00000394440 FUT9Q9Y231 359 aa11.83□□□□□ -0.52
CCT4-201ENST00000394440 IGHV3OR16-10A0A075B7F0 116 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 PAGE4O60829 102 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 IGHV4-38-2P0DP08 117 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 SELENOTP62341 195 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 ZNF90Q03938 601 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 MIR17HGQ75NE6 70 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.82□□□□□ -0.52
CCT4-201ENST00000394440 OR1L6Q8NGR2 347 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 TRGV9Q99603 122 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 MEGF9Q9H1U4 602 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 TRAV20A0A0B4J274 112 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 EGR2P11161 476 aaPredicted RBP11.82□□□□□ -0.52
CCT4-201ENST00000394440 BRD3OSQ6XYD6 125 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 LRRC75A-AS1Q8N1F1 130 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 C22orf15Q8WYQ4 148 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 C7orf69Q9H7B7 122 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 HIF1ANQ9NWT6 349 aa11.82□□□□□ -0.52
CCT4-201ENST00000394440 TMEM250H0YL14 139 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 K7EIM0 57 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 NUPL2O15504 423 aaKnown RBP11.81□□□□□ -0.52
CCT4-201ENST00000394440 TSPAN9O75954 239 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 GATA3P23771 443 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 TTC9CQ8N5M4 171 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 PIFOQ8TCI5 191 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 CENPEQ02224 2701 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 H3BQ15 152 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 GCHFRP30047 84 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 CEBPGP53567 150 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 DEFB113Q30KQ7 82 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 TMEM88Q6PEY1 159 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms