RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 OTORQ9NRC9 128 aa11.4□□□□□ -0.58
USP49-203ENST00000394253 C1orf122Q6ZSJ8 110 aa11.4□□□□□ -0.58
USP49-203ENST00000394253 ARRDC1-AS1Q9H2J1 176 aa11.4□□□□□ -0.58
USP49-203ENST00000394253 MRPS18AQ9NVS2 196 aaKnown RBP11.4□□□□□ -0.58
USP49-203ENST00000394253 UTF1Q5T230 341 aa11.4□□□□□ -0.59
USP49-203ENST00000394253 CBLN3Q6UW01 205 aa11.4□□□□□ -0.59
USP49-203ENST00000394253 CCL13Q99616 98 aa11.4□□□□□ -0.59
USP49-203ENST00000394253 TRGV3P03979 118 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 SLC25A48Q6ZT89 311 aaKnown RBP11.39□□□□□ -0.59
USP49-203ENST00000394253 NPIPB3Q92617 1050 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 SLC50A1Q9BRV3 221 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 TRGV11A0A075B6L2 103 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 C5orf47Q569G3 176 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 ABCA2Q9BZC7 2435 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 A6NNC1 897 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 LIFP15018 202 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 CCL20P78556 96 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 IGLV3-16A0A075B6K0 115 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 HLA-DQB1P01920 261 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 CCL8P80075 99 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 PPDPFLQ8WWR9 84 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 GTSCR1Q86UQ5 136 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.39□□□□□ -0.59
USP49-203ENST00000394253 TMEM54Q969K7 222 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 OSTCQ9NRP0 149 aa11.39□□□□□ -0.59
USP49-203ENST00000394253 TEX43Q6ZNM6 134 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 NEGR1Q7Z3B1 354 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 IGHV5-51A0A0C4DH38 117 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 TCRBV5S1A1TA0A578 114 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 C9JAW5 83 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 HAX1O00165 279 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 TM4SF5O14894 197 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 C9orf50Q5SZB4 431 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 EGR4Q05215 589 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 C1orf194Q5T5A4 169 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 ZNRF1Q8ND25 227 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 RNASE7Q9H1E1 156 aaKnown RBP11.38□□□□□ -0.59
USP49-203ENST00000394253 ZNF784Q8NCA9 323 aaPredicted RBP11.38□□□□□ -0.59
USP49-203ENST00000394253 GUSBP1Q15486 140 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 SRP19P09132 144 aaKnown RBP11.38□□□□□ -0.59
USP49-203ENST00000394253 STHQ8IWL8 128 aa11.38□□□□□ -0.59
USP49-203ENST00000394253 EVI2AP22794 236 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 MYMXA0A1B0GTQ4 84 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 A0A1W2PRE2 83 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 MSRB3Q8IXL7 192 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 OSR1Q8TAX0 266 aaPredicted RBP11.37□□□□□ -0.59
USP49-203ENST00000394253 PRADC1Q9BSG0 188 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 IGHV3-72A0A0B4J1Y9 119 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 AGFG2O95081 481 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 SCARF2Q96GP6 870 aaPredicted RBP11.37□□□□□ -0.59
USP49-203ENST00000394253 FBXL15Q9H469 300 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 PSG1P11464 419 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 COL9A1P20849 921 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 IGHV3-64A0A075B6Q5 118 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 TRGV4A0A0C4DH28 118 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 TMEM187Q14656 261 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 C17orf99Q6UX52 265 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 IGLV3-25P01717 112 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 PSG3Q16557 428 aa11.37□□□□□ -0.59
USP49-203ENST00000394253 HIVEP3Q5T1R4 2406 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 CCL1P22362 96 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 ABHD12Q8N2K0 398 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 TMEM126AQ9H061 195 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 H3BTX0 84 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 RASL10AQ92737 203 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 NUP210Q8TEM1 1887 aaPredicted RBP11.36□□□□□ -0.59
USP49-203ENST00000394253 HMGA1P17096 107 aaKnown RBP11.36□□□□□ -0.59
USP49-203ENST00000394253 C1QL3Q5VWW1 255 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 CHCHD5Q9BSY4 110 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 IGHG3P01860 377 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 NPIPB13A6NJU9 1138 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 RAMP1O60894 148 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 A0A1B0GTL3 188 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 A0A087WX48 190 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 NPC2P61916 151 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 SHISA4Q96DD7 197 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 GP6Q9HCN6 339 aa11.36□□□□□ -0.59
USP49-203ENST00000394253 HEPN1Q6WQI6 88 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 FOXA2Q9Y261 457 aaPredicted RBP11.35□□□□□ -0.59
USP49-203ENST00000394253 UPK2O00526 184 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 LHX9Q9NQ69 397 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 NHSQ6T4R5 1651 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 hADV29S1A0JD25 119 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 IL18BPO95998 194 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 TCRAP04437 139 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 GLRXP35754 106 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 CD300EQ496F6 205 aaPredicted RBP11.35□□□□□ -0.59
USP49-203ENST00000394253 C21orf62Q9NYP8 219 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 NANOS3P60323 173 aaKnown RBP11.35□□□□□ -0.59
USP49-203ENST00000394253 DUSP15Q9H1R2 295 aaPredicted RBP11.35□□□□□ -0.59
USP49-203ENST00000394253 RPUSD1Q9UJJ7 312 aaKnown RBP11.35□□□□□ -0.59
USP49-203ENST00000394253 A0A1W2PQF6 199 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 FCN3O75636 299 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 RPRMLQ8N4K4 120 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 TSKUQ8WUA8 353 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 FOXH1O75593 365 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 ERCC8Q13216 396 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 PEAR1Q5VY43 1037 aaPredicted RBP11.35□□□□□ -0.59
USP49-203ENST00000394253 SPATA25Q9BR10 227 aa11.35□□□□□ -0.59
USP49-203ENST00000394253 RPL34P49207 117 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms