RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 GGACTQ9BVM4 153 aa18.21■□□□□ 0.5
CNN3-202ENST00000394202 SH3BGRL3Q9H299 93 aa18.21■□□□□ 0.5
CNN3-202ENST00000394202 ARV1Q9H2C2 271 aa18.21■□□□□ 0.5
CNN3-202ENST00000394202 SLC25A32Q9H2D1 315 aa18.21■□□□□ 0.5
CNN3-202ENST00000394202 S4R3C0 116 aa18.21■□□□□ 0.5
CNN3-202ENST00000394202 K7EIM0 57 aa18.2■□□□□ 0.5
CNN3-202ENST00000394202 OR2J3O76001 311 aa18.2■□□□□ 0.5
CNN3-202ENST00000394202 MDKP21741 143 aaPredicted RBP18.2■□□□□ 0.5
CNN3-202ENST00000394202 TREML4Q6UXN2 200 aa18.2■□□□□ 0.5
CNN3-202ENST00000394202 MS4A10Q96PG2 267 aa18.2■□□□□ 0.5
CNN3-202ENST00000394202 ZNF355PQ9NSJ1 428 aa18.2■□□□□ 0.5
CNN3-202ENST00000394202 BORCS7-ASMTA0A0B4J1R7 106 aa18.19■□□□□ 0.5
CNN3-202ENST00000394202 NDUFB8O95169 186 aa18.19■□□□□ 0.5
CNN3-202ENST00000394202 RNASE1P07998 156 aaKnown RBP18.19■□□□□ 0.5
CNN3-202ENST00000394202 GPX4P36969 197 aaPredicted RBP18.19■□□□□ 0.5
CNN3-202ENST00000394202 C10orf99Q6UWK7 81 aa18.19■□□□□ 0.5
CNN3-202ENST00000394202 WDR61Q9GZS3 305 aaKnown RBP18.19■□□□□ 0.5
CNN3-202ENST00000394202 IGKV1OR2-108A0A075B7D4 117 aa18.19■□□□□ 0.5
CNN3-202ENST00000394202 TPT1P13693 172 aaKnown RBP18.19■□□□□ 0.5
CNN3-202ENST00000394202 SRSF2Q01130 221 aaKnown RBP18.19■□□□□ 0.5
CNN3-202ENST00000394202 CFHR3Q02985 330 aa18.19■□□□□ 0.5
CNN3-202ENST00000394202 ZNF329Q86UD4 541 aa18.19■□□□□ 0.5
CNN3-202ENST00000394202 Q8N2B8 174 aa18.19■□□□□ 0.5
CNN3-202ENST00000394202 CACNG8Q8WXS5 425 aa18.19■□□□□ 0.5
CNN3-202ENST00000394202 ACY3Q96HD9 319 aa18.19■□□□□ 0.5
CNN3-202ENST00000394202 SETD2Q9BYW2 2564 aaPredicted RBP18.18■□□□□ 0.5
CNN3-202ENST00000394202 KRBOX1C9JBD0 128 aa18.18■□□□□ 0.5
CNN3-202ENST00000394202 SCAF4O95104 1147 aaKnown RBP18.18■□□□□ 0.5
CNN3-202ENST00000394202 IFNA5P01569 189 aa18.18■□□□□ 0.5
CNN3-202ENST00000394202 Q6ZSV7 163 aa18.18■□□□□ 0.5
CNN3-202ENST00000394202 EIF4E3Q8N5X7 224 aaKnown RBP18.18■□□□□ 0.5
CNN3-202ENST00000394202 GINS3Q9BRX5 216 aa18.18■□□□□ 0.5
CNN3-202ENST00000394202 RSG1Q9BU20 258 aa18.18■□□□□ 0.5
CNN3-202ENST00000394202 ATP6V0CP27449 155 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 OR1L6Q8NGR2 347 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 NPVFQ9HCQ7 196 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 PLA2G2EQ9NZK7 142 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 WDR83OSQ9Y284 106 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 TRBV9A0A0B4J1U6 114 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 CORTO00230 105 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 AKR1C1Q04828 323 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 LCNL1Q6ZST4 164 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 TMED6Q8WW62 240 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 NPIPB3Q92617 1050 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 PHYHIPLQ96FC7 376 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 KLK15Q9H2R5 256 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 SERTAD4Q9NUC0 356 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 FBXL7Q9UJT9 491 aa18.17■□□□□ 0.5
CNN3-202ENST00000394202 LSM4Q9Y4Z0 139 aaKnown RBP18.17■□□□□ 0.5
CNN3-202ENST00000394202 FGF7P21781 194 aa18.16■□□□□ 0.5
CNN3-202ENST00000394202 KLK9Q2XQG4 91 aa18.16■□□□□ 0.5
CNN3-202ENST00000394202 BTNL8Q6UX41 500 aa18.16■□□□□ 0.5
CNN3-202ENST00000394202 KLK9Q9UKQ9 250 aa18.16■□□□□ 0.5
CNN3-202ENST00000394202 RND2P52198 227 aa18.15■□□□□ 0.5
CNN3-202ENST00000394202 RHOGP84095 191 aa18.15■□□□□ 0.5
CNN3-202ENST00000394202 SCGB1C1Q8TD33 95 aa18.15■□□□□ 0.5
CNN3-202ENST00000394202 ZNF580Q9UK33 172 aa18.15■□□□□ 0.5
CNN3-202ENST00000394202 JMJD1CQ15652 2540 aa18.15■□□□□ 0.5
CNN3-202ENST00000394202 FNDC10F2Z333 226 aa18.15■□□□□ 0.5
CNN3-202ENST00000394202 FAM74A1Q5RGS3 127 aa18.15■□□□□ 0.5
CNN3-202ENST00000394202 SLC35E1Q96K37 410 aa18.15■□□□□ 0.5
CNN3-202ENST00000394202 MGST2Q99735 147 aa18.15■□□□□ 0.5
CNN3-202ENST00000394202 IGLV1-40P01703 118 aa18.14■□□□□ 0.49
CNN3-202ENST00000394202 IGHV3-23P01764 117 aa18.14■□□□□ 0.49
CNN3-202ENST00000394202 TMEM144Q7Z5S9 345 aa18.14■□□□□ 0.49
CNN3-202ENST00000394202 PARD6GQ9BYG4 376 aaPredicted RBP18.14■□□□□ 0.49
CNN3-202ENST00000394202 SCO1O75880 301 aa18.13■□□□□ 0.49
CNN3-202ENST00000394202 SPP1P10451 314 aa18.13■□□□□ 0.49
CNN3-202ENST00000394202 C15orf32Q32M92 178 aa18.13■□□□□ 0.49
CNN3-202ENST00000394202 TMEM116Q8NCL8 245 aa18.13■□□□□ 0.49
CNN3-202ENST00000394202 LINC00052Q96N35 136 aa18.13■□□□□ 0.49
CNN3-202ENST00000394202 NPCDR1Q9BY65 106 aa18.13■□□□□ 0.49
CNN3-202ENST00000394202 EIF5AP63241 154 aaKnown RBP18.13■□□□□ 0.49
CNN3-202ENST00000394202 ETFRF1Q6IPR1 90 aa18.13■□□□□ 0.49
CNN3-202ENST00000394202 TEPPQ6URK8 271 aa18.13■□□□□ 0.49
CNN3-202ENST00000394202 IGKV1D-37A0A075B6S9 117 aa18.12■□□□□ 0.49
CNN3-202ENST00000394202 F8W735 103 aaPredicted RBP18.12■□□□□ 0.49
CNN3-202ENST00000394202 TSPAN9O75954 239 aa18.12■□□□□ 0.49
CNN3-202ENST00000394202 HIST1H1BP16401 226 aaKnown RBP18.12■□□□□ 0.49
CNN3-202ENST00000394202 ACSM6Q6P461 480 aa18.12■□□□□ 0.49
CNN3-202ENST00000394202 THYN1Q9P016 225 aa18.12■□□□□ 0.49
CNN3-202ENST00000394202 CYB5BO43169 146 aa18.11■□□□□ 0.49
CNN3-202ENST00000394202 TRGV3P03979 118 aa18.11■□□□□ 0.49
CNN3-202ENST00000394202 TMEM182Q6ZP80 229 aaPredicted RBP18.11■□□□□ 0.49
CNN3-202ENST00000394202 NECAP1Q8NC96 275 aa18.11■□□□□ 0.49
CNN3-202ENST00000394202 AGPAT2O15120 278 aa18.11■□□□□ 0.49
CNN3-202ENST00000394202 TCF21O43680 179 aa18.11■□□□□ 0.49
CNN3-202ENST00000394202 IGHG4P01861 327 aa18.11■□□□□ 0.49
CNN3-202ENST00000394202 CRYBA1P05813 215 aa18.11■□□□□ 0.49
CNN3-202ENST00000394202 PF4V1P10720 104 aa18.11■□□□□ 0.49
CNN3-202ENST00000394202 JMJD8Q96S16 334 aa18.11■□□□□ 0.49
CNN3-202ENST00000394202 GATA2P23769 480 aaPredicted RBP18.1■□□□□ 0.49
CNN3-202ENST00000394202 OR2G3Q8NGZ4 309 aa18.1■□□□□ 0.49
CNN3-202ENST00000394202 OR4X1Q8NH49 305 aa18.1■□□□□ 0.49
CNN3-202ENST00000394202 GGTLC1Q9BX51 225 aa18.1■□□□□ 0.49
CNN3-202ENST00000394202 C2CD3Q4AC94 2353 aa18.1■□□□□ 0.49
CNN3-202ENST00000394202 PSMB8P28062 276 aa18.1■□□□□ 0.49
CNN3-202ENST00000394202 OR10J1P30954 320 aa18.1■□□□□ 0.49
CNN3-202ENST00000394202 CAMLGP49069 296 aa18.1■□□□□ 0.49
CNN3-202ENST00000394202 TPPP2P59282 170 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms