RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 C22orf15Q8WYQ4 148 aa16.94■□□□□ 0.3
SPHK1-202ENST00000392496 SLC25A33Q9BSK2 321 aa16.94■□□□□ 0.3
SPHK1-202ENST00000392496 BAHCC1Q9P281 2608 aa16.94■□□□□ 0.3
SPHK1-202ENST00000392496 CXorf1O96002 111 aa16.94■□□□□ 0.3
SPHK1-202ENST00000392496 RND2P52198 227 aa16.94■□□□□ 0.3
SPHK1-202ENST00000392496 C19orf35Q6ZS72 473 aa16.94■□□□□ 0.3
SPHK1-202ENST00000392496 WNT10AQ9GZT5 417 aa16.94■□□□□ 0.3
SPHK1-202ENST00000392496 MRPL36Q9P0J6 103 aaKnown RBP16.94■□□□□ 0.3
SPHK1-202ENST00000392496 DMRT1Q9Y5R6 373 aa16.94■□□□□ 0.3
SPHK1-202ENST00000392496 IGKV1D-37A0A075B6S9 117 aa16.93■□□□□ 0.3
SPHK1-202ENST00000392496 TCRBV4S1A1TA0A5B7 111 aa16.93■□□□□ 0.3
SPHK1-202ENST00000392496 SELENOTP62341 195 aa16.93■□□□□ 0.3
SPHK1-202ENST00000392496 CX3CL1P78423 397 aa16.93■□□□□ 0.3
SPHK1-202ENST00000392496 IQCF2Q8IXL9 164 aa16.93■□□□□ 0.3
SPHK1-202ENST00000392496 TMEM116Q8NCL8 245 aa16.93■□□□□ 0.3
SPHK1-202ENST00000392496 SUN5Q8TC36 379 aa16.93■□□□□ 0.3
SPHK1-202ENST00000392496 ARPC1AQ92747 370 aa16.93■□□□□ 0.3
SPHK1-202ENST00000392496 SEPSECSQ9HD40 501 aaKnown RBP16.93■□□□□ 0.3
SPHK1-202ENST00000392496 BEX4Q9NWD9 120 aaPredicted RBP16.93■□□□□ 0.3
SPHK1-202ENST00000392496 TRAV20A0A0B4J274 112 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 MT-CO2P00403 227 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 MEF2BQ02080 365 aaPredicted RBP16.92■□□□□ 0.3
SPHK1-202ENST00000392496 Q8N9W7 124 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 NANPQ8TBE9 248 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 SPG11Q96JI7 2443 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 TRAV40A0A0B4J280 105 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 IGHV3-48P01763 117 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 GATA2P23769 480 aaPredicted RBP16.92■□□□□ 0.3
SPHK1-202ENST00000392496 GATA3P23771 443 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 KRTAP10-9P60411 292 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 RUSC1-AS1Q66K80 236 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 SPNS3Q6ZMD2 512 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.92■□□□□ 0.3
SPHK1-202ENST00000392496 FUT9Q9Y231 359 aa16.92■□□□□ 0.3
SPHK1-202ENST00000392496 A0A096LNT2 108 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 FAM74A7A6NL05 159 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 NPIPB5A8MRT5 1133 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 HLA-DRB1P01911 266 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 OR5G3P0C626 314 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 ARL14EPLP0DKL9 152 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 CEBPGP53567 150 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 CD81P60033 236 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 FAM74A3Q4VXF1 159 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 FAM78BQ5VT40 261 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 SPATA31B1PQ5VZV4 182 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 LRRC75A-AS1Q8N1F1 130 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 RNF2Q99496 336 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 TRGV9Q99603 122 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 FAM103A1Q9BTL3 118 aaKnown RBP16.91■□□□□ 0.3
SPHK1-202ENST00000392496 C7orf69Q9H7B7 122 aa16.91■□□□□ 0.3
SPHK1-202ENST00000392496 I3L2K1 104 aa16.9■□□□□ 0.3
SPHK1-202ENST00000392496 FAM90A2PQ658T7 463 aa16.9■□□□□ 0.3
SPHK1-202ENST00000392496 GATAD1Q8WUU5 269 aa16.9■□□□□ 0.3
SPHK1-202ENST00000392496 MEGF9Q9H1U4 602 aa16.9■□□□□ 0.3
SPHK1-202ENST00000392496 PSMB11A5LHX3 300 aa16.89■□□□□ 0.3
SPHK1-202ENST00000392496 PAGE4O60829 102 aa16.89■□□□□ 0.3
SPHK1-202ENST00000392496 NDPQ00604 133 aa16.89■□□□□ 0.3
SPHK1-202ENST00000392496 AWAT1Q58HT5 328 aa16.89■□□□□ 0.3
SPHK1-202ENST00000392496 RASL11BQ9BPW5 248 aa16.89■□□□□ 0.3
SPHK1-202ENST00000392496 TNFRSF19Q9NS68 423 aa16.89■□□□□ 0.3
SPHK1-202ENST00000392496 HIF1ANQ9NWT6 349 aa16.89■□□□□ 0.3
SPHK1-202ENST00000392496 ASH1LQ9NR48 2969 aaKnown RBP16.89■□□□□ 0.29
SPHK1-202ENST00000392496 IGHV3OR16-10A0A075B7F0 116 aa16.89■□□□□ 0.29
SPHK1-202ENST00000392496 TMEM250H0YL14 139 aa16.89■□□□□ 0.29
SPHK1-202ENST00000392496 ASPHD1Q5U4P2 390 aa16.89■□□□□ 0.29
SPHK1-202ENST00000392496 MIR17HGQ75NE6 70 aa16.89■□□□□ 0.29
SPHK1-202ENST00000392496 TTC9CQ8N5M4 171 aa16.89■□□□□ 0.29
SPHK1-202ENST00000392496 OR1L4Q8NGR5 311 aa16.89■□□□□ 0.29
SPHK1-202ENST00000392496 MRPL32Q9BYC8 188 aaKnown RBP16.89■□□□□ 0.29
SPHK1-202ENST00000392496 PUS1Q9Y606 427 aaKnown RBP eCLIP16.89■□□□□ 0.29
SPHK1-202ENST00000392496 IGHV7-81A0A0B4J1V7 117 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 H3BQ15 152 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 M0R036 132 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 GCHFRP30047 84 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 ZNF90Q03938 601 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 DEFB113Q30KQ7 82 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 LINC01356Q8N9X3 169 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 PFDN5Q99471 154 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 NIPSNAP3BQ9BS92 247 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 DNAJC4Q9NNZ3 241 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 TECRQ9NZ01 308 aaKnown RBP16.88■□□□□ 0.29
SPHK1-202ENST00000392496 ABCA12Q86UK0 2595 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 UNC79Q9P2D8 2635 aa16.88■□□□□ 0.29
SPHK1-202ENST00000392496 IGHV4-38-2P0DP08 117 aa16.87■□□□□ 0.29
SPHK1-202ENST00000392496 RHEBQ15382 184 aa16.87■□□□□ 0.29
SPHK1-202ENST00000392496 BRD3OSQ6XYD6 125 aa16.87■□□□□ 0.29
SPHK1-202ENST00000392496 OR4X1Q8NH49 305 aa16.87■□□□□ 0.29
SPHK1-202ENST00000392496 TMEM37Q8WXS4 190 aa16.87■□□□□ 0.29
SPHK1-202ENST00000392496 TXNDC17Q9BRA2 123 aa16.87■□□□□ 0.29
SPHK1-202ENST00000392496 IGHV3-21A0A0B4J1V1 117 aa16.87■□□□□ 0.29
SPHK1-202ENST00000392496 NUPL2O15504 423 aaKnown RBP16.87■□□□□ 0.29
SPHK1-202ENST00000392496 TAS2R45P59539 299 aa16.87■□□□□ 0.29
SPHK1-202ENST00000392496 LOXL1Q08397 574 aaPredicted RBP16.87■□□□□ 0.29
SPHK1-202ENST00000392496 OR4F5Q8NH21 305 aa16.87■□□□□ 0.29
SPHK1-202ENST00000392496 TVP23CQ96ET8 276 aa16.87■□□□□ 0.29
SPHK1-202ENST00000392496 OR4F4Q96R69 305 aa16.87■□□□□ 0.29
SPHK1-202ENST00000392496 C7orf77A4D0Y5 90 aa16.86■□□□□ 0.29
SPHK1-202ENST00000392496 K7EIM0 57 aa16.86■□□□□ 0.29
SPHK1-202ENST00000392496 BPIFB3P59826 476 aa16.86■□□□□ 0.29
SPHK1-202ENST00000392496 TMEM88Q6PEY1 159 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms