RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 VPS25Q9BRG1 176 aa11.91□□□□□ -0.5
LRRFIP1-204ENST00000392000 ZNF835Q9Y2P0 537 aa11.91□□□□□ -0.5
LRRFIP1-204ENST00000392000 SVEP1Q4LDE5 3571 aa11.91□□□□□ -0.5
LRRFIP1-204ENST00000392000 CD59P13987 128 aa11.91□□□□□ -0.5
LRRFIP1-204ENST00000392000 KIR2DL2P43627 348 aaPredicted RBP11.91□□□□□ -0.5
LRRFIP1-204ENST00000392000 TMEM178AQ8NBL3 297 aa11.91□□□□□ -0.5
LRRFIP1-204ENST00000392000 NPIPB3Q92617 1050 aa11.91□□□□□ -0.5
LRRFIP1-204ENST00000392000 GUCD1Q96NT3 240 aa11.91□□□□□ -0.5
LRRFIP1-204ENST00000392000 ZPBPQ9BS86 351 aa11.91□□□□□ -0.5
LRRFIP1-204ENST00000392000 AMMECR1Q9Y4X0 333 aaPredicted RBP11.91□□□□□ -0.5
LRRFIP1-204ENST00000392000 TLN1Q9Y490 2541 aaKnown RBP11.91□□□□□ -0.5
LRRFIP1-204ENST00000392000 MUC21A0A0G2JKD1 596 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 MUC21A0A140T8X8 626 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 SLC25A5P05141 298 aaKnown RBP11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 MUC21Q5SSG8 566 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 WDR31Q8NA23 367 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 NAA38Q9BRA0 125 aaKnown RBP11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 IFI27L2Q9H2X8 130 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 ZFP30Q9Y2G7 519 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 HIGD1CA8MV81 97 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 C15orf65H3BRN8 121 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 ISLRO14498 428 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 LINC00173Q6ZV60 143 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 FLYWCH2Q96CP2 140 aaKnown RBP11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 PGLYRP4Q96LB8 373 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 BET1LQ9NYM9 111 aa11.9□□□□□ -0.5
LRRFIP1-204ENST00000392000 SRRM4A7MD48 611 aaKnown RBP11.9□□□□□ -0.51
LRRFIP1-204ENST00000392000 YPEL1O60688 119 aa11.9□□□□□ -0.51
LRRFIP1-204ENST00000392000 AMY1AP04745 511 aa11.9□□□□□ -0.51
LRRFIP1-204ENST00000392000 CEACAM8P31997 349 aaPredicted RBP11.9□□□□□ -0.51
LRRFIP1-204ENST00000392000 CX3CL1P78423 397 aa11.9□□□□□ -0.51
LRRFIP1-204ENST00000392000 GCSAMQ8N6F7 178 aa11.9□□□□□ -0.51
LRRFIP1-204ENST00000392000 OR1B1Q8NGR6 318 aa11.9□□□□□ -0.51
LRRFIP1-204ENST00000392000 ZNF596Q8TC21 504 aa11.9□□□□□ -0.51
LRRFIP1-204ENST00000392000 RAB1CQ92928 201 aa11.9□□□□□ -0.51
LRRFIP1-204ENST00000392000 YPEL2Q96QA6 119 aa11.9□□□□□ -0.51
LRRFIP1-204ENST00000392000 GSX1Q9H4S2 264 aaPredicted RBP11.9□□□□□ -0.51
LRRFIP1-204ENST00000392000 SPAARA0A1B0GVQ0 90 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 CA7P43166 264 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 VWC2Q2TAL6 325 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 WDR73Q6P4I2 378 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 Q6ZT83 130 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 TMEM167BQ9NRX6 74 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 C15orf61A6NNL5 157 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 C21orf140B9A014 251 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 CDX4O14627 284 aaPredicted RBP11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 APOA2P02652 100 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 WT1P19544 449 aaPredicted RBP11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 TAS2R45P59539 299 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 SELENOTP62341 195 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 DEFB109BQ30KR1 87 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 KLHDC1Q8N7A1 406 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 HARBI1Q96MB7 349 aa11.89□□□□□ -0.51
LRRFIP1-204ENST00000392000 NDUFB8O95169 186 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 NIT1Q86X76 327 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 IDI2-AS1Q9NZ38 188 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 TRGV10A0A0A0MS01 117 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 IGHV2OR16-5A0A0B4J2B6 119 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 MGST3O14880 152 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 IGLL1P15814 213 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 TSPOP30536 169 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 MPV17L2Q567V2 206 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 C18orf32Q8TCD1 76 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 GNB1LQ9BYB4 327 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 TRAV8-1A0A0A6YYK1 113 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 IGHV1-18A0A0C4DH31 117 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 NUDT3O95989 172 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 CCL3L1P16619 93 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 FXYD7P58549 80 aa11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 INO80CQ6PI98 192 aaPredicted RBP11.88□□□□□ -0.51
LRRFIP1-204ENST00000392000 PGPA6NDG6 321 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 UQCRFS1P47985 274 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 PRRX1P54821 245 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 EBLN2Q6P2I7 272 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 CREBBPQ92793 2442 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 HLA-DQA1P01909 254 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 C8orf88P0DMB2 117 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 ZNF503Q96F45 646 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 PAXXQ9BUH6 204 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 SFXN3Q9BWM7 321 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 EIF4EBP1Q13541 118 aaPredicted RBP11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 ZNF738Q8NE65 137 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 NUP35Q8NFH5 326 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 NUDT10Q8NFP7 164 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
LRRFIP1-204ENST00000392000 ATRXP46100 2492 aa11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 E7EUB6 86 aa11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 SPACA3Q8IXA5 215 aa11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 LSM4Q9Y4Z0 139 aaKnown RBP11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 TMSB15BA0A087X1C1 80 aa11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 SAA1P0DJI8 122 aaPredicted RBP11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 SELENOVP59797 346 aa11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 DIAPH2-AS1Q14236 149 aa11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 DAZAP1Q96EP5 407 aaKnown RBP11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 HES4Q9HCC6 221 aa11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 JPT1Q9UK76 154 aa11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 ARHGAP32A7KAX9 2087 aa11.86□□□□□ -0.51
LRRFIP1-204ENST00000392000 AREGP15514 252 aa11.85□□□□□ -0.51
LRRFIP1-204ENST00000392000 Q0VG73 95 aa11.85□□□□□ -0.51
LRRFIP1-204ENST00000392000 TMEM116Q8NCL8 245 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms