RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SNRPEP62304 92 aaKnown RBP18.51■□□□□ 0.55
VPS16-201ENST00000380443 BTF3L4Q96K17 158 aa18.51■□□□□ 0.55
VPS16-201ENST00000380443 PYGO2Q9BRQ0 406 aa18.51■□□□□ 0.55
VPS16-201ENST00000380443 SLC25A33Q9BSK2 321 aa18.51■□□□□ 0.55
VPS16-201ENST00000380443 YTHDF2Q9Y5A9 579 aaKnown RBP18.51■□□□□ 0.55
VPS16-201ENST00000380443 PSMB11A5LHX3 300 aa18.51■□□□□ 0.55
VPS16-201ENST00000380443 IGHV2-5P01817 119 aa18.51■□□□□ 0.55
VPS16-201ENST00000380443 PFN1P07737 140 aaKnown RBP18.51■□□□□ 0.55
VPS16-201ENST00000380443 SRP14P37108 136 aaKnown RBP18.51■□□□□ 0.55
VPS16-201ENST00000380443 CCDC144NLQ6NUI1 221 aa18.51■□□□□ 0.55
VPS16-201ENST00000380443 LINC01551Q86U37 167 aa18.51■□□□□ 0.55
VPS16-201ENST00000380443 OR51G1Q8NGK1 321 aa18.51■□□□□ 0.55
VPS16-201ENST00000380443 NPIPB3Q92617 1050 aa18.51■□□□□ 0.55
VPS16-201ENST00000380443 SSX3Q99909 188 aa18.51■□□□□ 0.55
VPS16-201ENST00000380443 ADGRG4Q8IZF6 3080 aa18.5■□□□□ 0.55
VPS16-201ENST00000380443 ABCA4P78363 2273 aa18.5■□□□□ 0.55
VPS16-201ENST00000380443 AP4M1O00189 453 aa18.5■□□□□ 0.55
VPS16-201ENST00000380443 FOXH1O75593 365 aa18.5■□□□□ 0.55
VPS16-201ENST00000380443 DLX1P56177 255 aa18.5■□□□□ 0.55
VPS16-201ENST00000380443 LINC00518Q8N0U6 118 aa18.5■□□□□ 0.55
VPS16-201ENST00000380443 IMMP2LQ96T52 175 aa18.5■□□□□ 0.55
VPS16-201ENST00000380443 TRGV9Q99603 122 aa18.5■□□□□ 0.55
VPS16-201ENST00000380443 CNTFRP26992 372 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 MINOS1Q5TGZ0 78 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 NPBQ8NG41 125 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 UBTD1Q9HAC8 227 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 F11RQ9Y624 299 aaKnown RBP18.49■□□□□ 0.55
VPS16-201ENST00000380443 MINOS1-NBL1R4GNA1 71 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 ELOA3CA0A087WX78 387 aaPredicted RBP18.49■□□□□ 0.55
VPS16-201ENST00000380443 A0A1W2PPR1 153 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 A0A1W2PRE2 83 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 C9JCJ5 164 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 TIMM23O14925 209 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 GALR1P47211 349 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 TMEM116Q8NCL8 245 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 OR1L6Q8NGR2 347 aa18.49■□□□□ 0.55
VPS16-201ENST00000380443 IGKV1D-37A0A075B6S9 117 aa18.48■□□□□ 0.55
VPS16-201ENST00000380443 TEX22C9J3V5 150 aa18.48■□□□□ 0.55
VPS16-201ENST00000380443 COX7A2P2O60397 106 aa18.48■□□□□ 0.55
VPS16-201ENST00000380443 GATA2P23769 480 aaPredicted RBP18.48■□□□□ 0.55
VPS16-201ENST00000380443 TMEM37Q8WXS4 190 aa18.48■□□□□ 0.55
VPS16-201ENST00000380443 CFHR4Q92496 578 aa18.48■□□□□ 0.55
VPS16-201ENST00000380443 FBXL15Q9H469 300 aa18.48■□□□□ 0.55
VPS16-201ENST00000380443 MOSP00540 346 aa18.47■□□□□ 0.55
VPS16-201ENST00000380443 AKR1D1P51857 326 aa18.47■□□□□ 0.55
VPS16-201ENST00000380443 KIAA0141Q14154 515 aaPredicted RBP18.47■□□□□ 0.55
VPS16-201ENST00000380443 PLGLAQ15195 96 aa18.47■□□□□ 0.55
VPS16-201ENST00000380443 C10orf113Q5VZT2 155 aa18.47■□□□□ 0.55
VPS16-201ENST00000380443 HCP5Q6MZN7 132 aa18.47■□□□□ 0.55
VPS16-201ENST00000380443 KCNIP4Q6PIL6 250 aa18.47■□□□□ 0.55
VPS16-201ENST00000380443 SRSF12Q8WXF0 261 aaKnown RBP18.47■□□□□ 0.55
VPS16-201ENST00000380443 SCO2A0A1W2PP80 73 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 NBR2O15453 112 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 OR7C2O60412 319 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 NDUFA3O95167 84 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 S100A8P05109 93 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 RNF224P0DH78 156 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 STXBP6Q8NFX7 210 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 MISP3Q96FF7 219 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 USP9XQ93008 2570 aaPredicted RBP18.46■□□□□ 0.55
VPS16-201ENST00000380443 REG1AP05451 166 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 CDKN1AP38936 164 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 PRB3Q04118 309 aaPredicted RBP18.46■□□□□ 0.55
VPS16-201ENST00000380443 ZNF503Q96F45 646 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 TCEAL7Q9BRU2 100 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 SRD5A3Q9H8P0 318 aa18.46■□□□□ 0.55
VPS16-201ENST00000380443 COL12A1Q99715 3063 aa18.46■□□□□ 0.54
VPS16-201ENST00000380443 OR4X1Q8NH49 305 aa18.45■□□□□ 0.54
VPS16-201ENST00000380443 TNFRSF19Q9NS68 423 aa18.45■□□□□ 0.54
VPS16-201ENST00000380443 RPL35P42766 123 aaKnown RBP18.44■□□□□ 0.54
VPS16-201ENST00000380443 MMDQ15546 238 aa18.44■□□□□ 0.54
VPS16-201ENST00000380443 LDLRAD2Q5SZI1 272 aa18.44■□□□□ 0.54
VPS16-201ENST00000380443 OR2T10Q8NGZ9 312 aa18.44■□□□□ 0.54
VPS16-201ENST00000380443 FAM167A-AS1Q96KT0 104 aa18.44■□□□□ 0.54
VPS16-201ENST00000380443 GGCTO75223 188 aaKnown RBP18.44■□□□□ 0.54
VPS16-201ENST00000380443 MFAP2P55001 183 aa18.44■□□□□ 0.54
VPS16-201ENST00000380443 FABP9Q0Z7S8 132 aa18.44■□□□□ 0.54
VPS16-201ENST00000380443 PSMG3-AS1Q96PY0 264 aa18.44■□□□□ 0.54
VPS16-201ENST00000380443 DERL1Q9BUN8 251 aa18.44■□□□□ 0.54
VPS16-201ENST00000380443 MDFIC2A0A1B0GVS7 189 aa18.43■□□□□ 0.54
VPS16-201ENST00000380443 LCN2P80188 198 aa18.43■□□□□ 0.54
VPS16-201ENST00000380443 VMO1Q7Z5L0 202 aa18.43■□□□□ 0.54
VPS16-201ENST00000380443 SLC25A2Q9BXI2 301 aa18.43■□□□□ 0.54
VPS16-201ENST00000380443 TBL2Q9Y4P3 447 aaKnown RBP18.43■□□□□ 0.54
VPS16-201ENST00000380443 LRRK2Q5S007 2527 aa18.43■□□□□ 0.54
VPS16-201ENST00000380443 PLP1P60201 277 aa18.42■□□□□ 0.54
VPS16-201ENST00000380443 SSBP2P81877 361 aaPredicted RBP18.42■□□□□ 0.54
VPS16-201ENST00000380443 PERPQ96FX8 193 aa18.42■□□□□ 0.54
VPS16-201ENST00000380443 SFRP2Q96HF1 295 aa18.42■□□□□ 0.54
VPS16-201ENST00000380443 HILPDAQ9Y5L2 63 aa18.42■□□□□ 0.54
VPS16-201ENST00000380443 OVOL3O00110 214 aa18.42■□□□□ 0.54
VPS16-201ENST00000380443 CNIH1O95406 144 aa18.42■□□□□ 0.54
VPS16-201ENST00000380443 TRGC2P03986 189 aa18.42■□□□□ 0.54
VPS16-201ENST00000380443 ZNF90Q03938 601 aa18.42■□□□□ 0.54
VPS16-201ENST00000380443 FOXL1Q12952 345 aa18.42■□□□□ 0.54
VPS16-201ENST00000380443 EAF1Q96JC9 268 aaPredicted RBP18.42■□□□□ 0.54
VPS16-201ENST00000380443 MRPL36Q9P0J6 103 aaKnown RBP18.42■□□□□ 0.54
VPS16-201ENST00000380443 A1L4Q6 167 aa18.41■□□□□ 0.54
VPS16-201ENST00000380443 PPP5D1E7EU14 171 aa18.41■□□□□ 0.54
VPS16-201ENST00000380443 TYMSP04818 313 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms