RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 OPRK1P41145 380 aa14.32□□□□□ -0.12
SSU72-203ENST00000378725 PAX9P55771 341 aa14.32□□□□□ -0.12
SSU72-203ENST00000378725 OR4X1Q8NH49 305 aa14.32□□□□□ -0.12
SSU72-203ENST00000378725 SMIM8Q96KF7 97 aa14.32□□□□□ -0.12
SSU72-203ENST00000378725 CHRDL1Q9BU40 450 aa14.32□□□□□ -0.12
SSU72-203ENST00000378725 GPR61Q9BZJ8 451 aa14.32□□□□□ -0.12
SSU72-203ENST00000378725 ZNF436Q9C0F3 470 aaPredicted RBP14.32□□□□□ -0.12
SSU72-203ENST00000378725 ZC4H2Q9NQZ6 224 aa14.32□□□□□ -0.12
SSU72-203ENST00000378725 CMYA5Q8N3K9 4069 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 SEC14L6B5MCN3 397 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 TMEM50AO95807 157 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 SLC25A4P12235 298 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 NPBWR1P48145 328 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 OXA1LQ15070 435 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 KPRPQ5T749 579 aaPredicted RBP14.31□□□□□ -0.12
SSU72-203ENST00000378725 C9orf66Q5T8R8 295 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 ETFRF1Q6IPR1 90 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 IL34Q6ZMJ4 242 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 REC114Q7Z4M0 266 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 UBAC2Q8NBM4 344 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 OR9G4Q8NGQ1 327 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 RAB40CQ96S21 281 aa14.31□□□□□ -0.12
SSU72-203ENST00000378725 MRPL36Q9P0J6 103 aaKnown RBP14.31□□□□□ -0.12
SSU72-203ENST00000378725 RCL1Q9Y2P8 373 aaKnown RBP14.31□□□□□ -0.12
SSU72-203ENST00000378725 SSSCA1O60232 199 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 SCGB1D2O95969 90 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 IFNA4P05014 189 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 GPX4P36969 197 aaPredicted RBP14.3□□□□□ -0.12
SSU72-203ENST00000378725 INSL3P51460 131 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 TAS2R30P59541 319 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 RAB11AP62491 216 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 CD69Q07108 199 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 BEAN1Q3B7T3 259 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 FAM106AQ4KMX7 169 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 PRSS54Q6PEW0 395 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 TMEM116Q8NCL8 245 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 ZNF414Q96IQ9 312 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 OR4C12Q96R67 309 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 ELOVL1Q9BW60 279 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 PSENENQ9NZ42 101 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 ALG5Q9Y673 324 aa14.3□□□□□ -0.12
SSU72-203ENST00000378725 K7EPK0 472 aa14.29□□□□□ -0.12
SSU72-203ENST00000378725 GOSR2O14653 212 aa14.29□□□□□ -0.12
SSU72-203ENST00000378725 NUPL2O15504 423 aaKnown RBP14.29□□□□□ -0.12
SSU72-203ENST00000378725 SSNA1O43805 119 aa14.29□□□□□ -0.12
SSU72-203ENST00000378725 GNG7O60262 68 aa14.29□□□□□ -0.12
SSU72-203ENST00000378725 CLN5O75503 358 aa14.29□□□□□ -0.12
SSU72-203ENST00000378725 SPANXN5Q5MJ07 72 aa14.29□□□□□ -0.12
SSU72-203ENST00000378725 CACNG8Q8WXS5 425 aa14.29□□□□□ -0.12
SSU72-203ENST00000378725 SIGLEC8Q9NYZ4 499 aa14.29□□□□□ -0.12
SSU72-203ENST00000378725 STRAPQ9Y3F4 350 aaKnown RBP14.29□□□□□ -0.12
SSU72-203ENST00000378725 MGAM2Q2M2H8 2515 aa14.29□□□□□ -0.12
SSU72-203ENST00000378725 PRSS46E5RG02 174 aa14.28□□□□□ -0.12
SSU72-203ENST00000378725 SIX6O95475 246 aa14.28□□□□□ -0.12
SSU72-203ENST00000378725 CSN3P07498 182 aa14.28□□□□□ -0.12
SSU72-203ENST00000378725 NMES1Q9C002 83 aa14.28□□□□□ -0.12
SSU72-203ENST00000378725 C11orf1Q9H5F2 150 aa14.28□□□□□ -0.12
SSU72-203ENST00000378725 PEMTQ9UBM1 199 aa14.28□□□□□ -0.12
SSU72-203ENST00000378725 TRAV30A0A087WSZ9 112 aa14.27□□□□□ -0.13
SSU72-203ENST00000378725 NDUFA4O00483 81 aa14.27□□□□□ -0.13
SSU72-203ENST00000378725 TSC22D2O75157 780 aa14.27□□□□□ -0.13
SSU72-203ENST00000378725 H2BFSP57053 126 aa14.27□□□□□ -0.13
SSU72-203ENST00000378725 CYCSP99999 105 aaKnown RBP14.27□□□□□ -0.13
SSU72-203ENST00000378725 RELQ04864 619 aaPredicted RBP14.27□□□□□ -0.13
SSU72-203ENST00000378725 EGFEM1PQ0D2K5 195 aa14.27□□□□□ -0.13
SSU72-203ENST00000378725 TMEM14EPQ6UXP3 125 aa14.27□□□□□ -0.13
SSU72-203ENST00000378725 UNQ9165/PRO28630Q6UXU0 137 aa14.27□□□□□ -0.13
SSU72-203ENST00000378725 SLC16A13Q7RTY0 426 aa14.27□□□□□ -0.13
SSU72-203ENST00000378725 IGHV3-35A0A0C4DH35 117 aa14.26□□□□□ -0.13
SSU72-203ENST00000378725 PMS2P5A8MQ11 134 aa14.26□□□□□ -0.13
SSU72-203ENST00000378725 A8MWP6 167 aa14.26□□□□□ -0.13
SSU72-203ENST00000378725 H3BP45 60 aa14.26□□□□□ -0.13
SSU72-203ENST00000378725 SAP30O75446 220 aa14.26□□□□□ -0.13
SSU72-203ENST00000378725 RND2P52198 227 aa14.26□□□□□ -0.13
SSU72-203ENST00000378725 RAB32Q13637 225 aa14.26□□□□□ -0.13
SSU72-203ENST00000378725 NPIPB3Q92617 1050 aa14.26□□□□□ -0.13
SSU72-203ENST00000378725 PAIP2BQ9ULR5 123 aaKnown RBP14.26□□□□□ -0.13
SSU72-203ENST00000378725 LSM5Q9Y4Y9 91 aaKnown RBP14.26□□□□□ -0.13
SSU72-203ENST00000378725 ZNF320A2RRD8 509 aa14.25□□□□□ -0.13
SSU72-203ENST00000378725 C2orf70A6NJV1 201 aa14.25□□□□□ -0.13
SSU72-203ENST00000378725 IGKV1-17P01599 117 aa14.25□□□□□ -0.13
SSU72-203ENST00000378725 ELLP55199 621 aaPredicted RBP14.25□□□□□ -0.13
SSU72-203ENST00000378725 GAMTQ14353 236 aa14.25□□□□□ -0.13
SSU72-203ENST00000378725 ADAMTSL5Q6ZMM2 481 aa14.25□□□□□ -0.13
SSU72-203ENST00000378725 TMEM190Q8WZ59 177 aa14.25□□□□□ -0.13
SSU72-203ENST00000378725 MGAT4CQ9UBM8 478 aa14.25□□□□□ -0.13
SSU72-203ENST00000378725 TMEM213A2RRL7 107 aa14.24□□□□□ -0.13
SSU72-203ENST00000378725 K7EMT4 169 aa14.24□□□□□ -0.13
SSU72-203ENST00000378725 L7N2F9 121 aa14.24□□□□□ -0.13
SSU72-203ENST00000378725 IGLC1P0CG04 106 aa14.24□□□□□ -0.13
SSU72-203ENST00000378725 KRTAP10-11P60412 298 aa14.24□□□□□ -0.13
SSU72-203ENST00000378725 VAMP2P63027 116 aa14.24□□□□□ -0.13
SSU72-203ENST00000378725 OR1S2Q8NGQ3 325 aa14.24□□□□□ -0.13
SSU72-203ENST00000378725 UFC1Q9Y3C8 167 aa14.24□□□□□ -0.13
SSU72-203ENST00000378725 SCGB2A1O75556 95 aa14.23□□□□□ -0.13
SSU72-203ENST00000378725 IGLV1-51P01701 117 aa14.23□□□□□ -0.13
SSU72-203ENST00000378725 C8orf88P0DMB2 117 aa14.23□□□□□ -0.13
SSU72-203ENST00000378725 FOLR2P14207 255 aa14.23□□□□□ -0.13
SSU72-203ENST00000378725 PVALBP20472 110 aaPredicted RBP14.23□□□□□ -0.13
SSU72-203ENST00000378725 S100A10P60903 97 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms