RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 B3GALT5-AS1P59052 145 aa12.52□□□□□ -0.41
NPHP4-201ENST00000378156 SGK494Q96LW2 274 aa12.52□□□□□ -0.41
NPHP4-201ENST00000378156 ATP5LO75964 103 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 IGKV1D-33P01593 117 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 IGKV1-33P01594 117 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 MBNL2Q5VZF2 373 aaKnown RBP12.51□□□□□ -0.41
NPHP4-201ENST00000378156 SPCS1Q9Y6A9 102 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 IL6RP08887 468 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-201ENST00000378156 NPPCP23582 126 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 CFPP27918 469 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 HGFACQ04756 655 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 SRSF4Q08170 494 aaKnown RBP12.51□□□□□ -0.41
NPHP4-201ENST00000378156 MORN2Q502X0 79 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 CADP27708 2225 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 PRSS8Q16651 343 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 FANCMQ8IYD8 2048 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 SRSF6Q13247 344 aaKnown RBP12.51□□□□□ -0.41
NPHP4-201ENST00000378156 EEF1AKMT3Q96AZ1 226 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 KIR2DL4Q99706 377 aa12.51□□□□□ -0.41
NPHP4-201ENST00000378156 IGHV1-46P01743 117 aa12.5□□□□□ -0.41
NPHP4-201ENST00000378156 ATP5G3P48201 142 aa12.5□□□□□ -0.41
NPHP4-201ENST00000378156 FOXA3P55318 350 aaPredicted RBP12.5□□□□□ -0.41
NPHP4-201ENST00000378156 C5orf30Q96GV9 206 aa12.5□□□□□ -0.41
NPHP4-201ENST00000378156 LYNX1G3V0Z9 82 aa12.5□□□□□ -0.41
NPHP4-201ENST00000378156 LYNX1P0DP58 116 aa12.5□□□□□ -0.41
NPHP4-201ENST00000378156 Q6AWC8 147 aa12.5□□□□□ -0.41
NPHP4-201ENST00000378156 MRPL16Q9NX20 251 aaKnown RBP12.5□□□□□ -0.41
NPHP4-201ENST00000378156 SAA2-SAA4A0A096LPE2 208 aa12.5□□□□□ -0.41
NPHP4-201ENST00000378156 SAA2P0DJI9 122 aaPredicted RBP12.5□□□□□ -0.41
NPHP4-201ENST00000378156 GOLT1AQ6ZVE7 132 aa12.5□□□□□ -0.41
NPHP4-201ENST00000378156 SRRM5B3KS81 715 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 ARL6IP6Q8N6S5 226 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 VSIRQ9H7M9 311 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 DENND4CQ5VZ89 1909 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 DLX6P56179 175 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 TMEM42Q69YG0 159 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 Q6ZS92 163 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 LINC00305Q7Z4B0 112 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 C10orf126Q8N4M7 172 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 PCNX2A6NKB5 2137 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 PPP1R17O96001 155 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 RPL23P62829 140 aaKnown RBP12.49□□□□□ -0.41
NPHP4-201ENST00000378156 C7orf69Q9H7B7 122 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 TRBV20OR9-2A0A075B6H5 130 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 A0A1B0GUT8 65 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 IGFBP2P18065 325 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 JKAMPQ9P055 326 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 MED13LQ71F56 2210 aa12.49□□□□□ -0.41
NPHP4-201ENST00000378156 TRAV8-6A0A0B4J262 113 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 COLCA2A8K830 154 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 NAPSAO96009 420 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 SAMD13Q5VXD3 122 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 CENPVQ7Z7K6 275 aaPredicted RBP12.48□□□□□ -0.41
NPHP4-201ENST00000378156 CACNG8Q8WXS5 425 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 PRELID3AQ96N28 172 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 GPR82Q96P67 336 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 NRN1Q9NPD7 142 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 MUC6Q6W4X9 2439 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 HIST1H2BKO60814 126 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 LILRA1O75019 489 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 HIST1H2BJP06899 126 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 HIST1H2BOP23527 126 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 HIST1H2BBP33778 126 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 HIST1H2BDP58876 126 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 HIST1H2BCP62807 126 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 HIST2H2BEQ16778 126 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 RNFT1Q5M7Z0 435 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.48□□□□□ -0.41
NPHP4-201ENST00000378156 HIST1H2BHQ93079 126 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 IMMP2LQ96T52 175 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 HIST1H2BNQ99877 126 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 HIST1H2BMQ99879 126 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 TMEM133Q9H2Q1 129 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 SLC25A15Q9Y619 301 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 SLC17A3O00476 420 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 CGAP01215 116 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 IZUMO1RA6ND01 250 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 IGHG3P01860 377 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 TRGV3P03979 118 aa12.48□□□□□ -0.41
NPHP4-201ENST00000378156 SCO2A0A1W2PP80 73 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 TSPAN13O95857 204 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 C1orf147Q96MC9 270 aaPredicted RBP12.47□□□□□ -0.41
NPHP4-201ENST00000378156 TMEM160Q9NX00 188 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 NOTCH3Q9UM47 2321 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 LY6G6EA0A0G2JKS1 128 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 SERF1AO75920 110 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 DNAL4O96015 105 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 APOHP02749 345 aaPredicted RBP12.47□□□□□ -0.41
NPHP4-201ENST00000378156 NBEAP1P0C6P0 100 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 SAA1P0DJI8 122 aaPredicted RBP12.47□□□□□ -0.41
NPHP4-201ENST00000378156 DERL1Q9BUN8 251 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 U3KQA8 63 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 TANC1Q9C0D5 1861 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 IGHV3OR16-13A0A075B7E8 117 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 IGHV3-74A0A0B4J1X5 117 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 GATA2P23769 480 aaPredicted RBP12.47□□□□□ -0.41
NPHP4-201ENST00000378156 TMEM242Q9NWH2 141 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 FBXL7Q9UJT9 491 aa12.47□□□□□ -0.41
NPHP4-201ENST00000378156 MBD3L4A6NDZ8 208 aaPredicted RBP12.46□□□□□ -0.41
NPHP4-201ENST00000378156 MBD3L3A6NE82 208 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms