RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ERVK11-1P61568 191 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 LEMD1Q68G75 181 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 C10orf105Q8TEF2 133 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 KIAA1549Q9HCM3 1950 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 CTXND1A0A1B0GTU2 59 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 H0YJW9 148 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 IGHV4-59P01825 116 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 RAB4AP20338 218 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 DEFB112Q30KQ8 113 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 C11orf53Q8IXP5 236 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 RAB24Q969Q5 203 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 SMIM8Q96KF7 97 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 IGKV1-6A0A0C4DH72 117 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 C15orf61A6NNL5 157 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 RND3P61587 244 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 SNRPD3P62318 126 aaKnown RBP6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 ZNF585BQ52M93 769 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 LINC00305Q7Z4B0 112 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 BAGE2Q86Y30 109 aa6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 FAM110DQ8TAY7 271 aaPredicted RBP6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 GSX1Q9H4S2 264 aaPredicted RBP6.89□□□□□ -1.31
CRNKL1-202ENST00000377340 OOSP1A8MZH6 123 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 PPP5D1E7EU14 171 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 IGHV4-38-2P0DP08 117 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 ZNF429Q86V71 674 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 BAGE3Q86Y29 109 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 TBL2Q9Y4P3 447 aaKnown RBP6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 MAP1AP78559 2803 aaPredicted RBP6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 MGAM2Q2M2H8 2515 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 TEX50A0A1B0GTY4 177 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 IGSF23A1L1A6 192 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 RGS13O14921 159 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 MPDU1O75352 247 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 VENTXO95231 258 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 CXorf1O96002 111 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 IGHV2-70P01814 119 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 LMO1P25800 156 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 TEX38Q6PEX7 206 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 TMEM88Q6PEY1 159 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 C18orf12Q96KH6 178 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 C1orf147Q96MC9 270 aaPredicted RBP6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 SIGLEC9Q9Y336 463 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 LOC105371267A0A1B0GV96 52 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 HELTA6NFD8 242 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 PITX3O75364 302 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 RNF224P0DH78 156 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 FHITP49789 147 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 KHDC3LQ587J8 217 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 TEX36Q5VZQ5 186 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 ASCL4Q6XD76 172 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 GLMPQ8WWB7 406 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 WFDC12Q8WWY7 111 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 WDR61Q9GZS3 305 aaKnown RBP6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 FGF23Q9GZV9 251 aaPredicted RBP6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 BIN3Q9NQY0 253 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 VPS13AQ96RL7 3174 aa6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 ZNF106Q9H2Y7 1883 aaKnown RBP6.88□□□□□ -1.31
CRNKL1-202ENST00000377340 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 RBFOX2O43251 390 aaKnown RBP eCLIP6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 SIAH2O43255 324 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 GATCO43716 136 aaKnown RBP6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 DANCRP0C864 163 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 AREGP15514 252 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 CXCL2P19875 107 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 CD33P20138 364 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 FABP9Q0Z7S8 132 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 BATFQ16520 125 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 SH3BGRL3Q9H299 93 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 TCF21O43680 179 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 C8orf88P0DMB2 117 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 SERF2P84101 59 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 RBFOX3A6NFN3 312 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 TFF3Q07654 80 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 TMEM241Q24JQ0 296 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 RRN3P1Q2M238 152 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 C17orf58Q2M2W7 97 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 C5orf17Q8NAS9 161 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 RAX2Q96IS3 184 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 MMP9P14780 707 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 HTN3P15516 51 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 ICAM4Q14773 271 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 SRSF7Q16629 238 aaKnown RBP eCLIP6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 CYP2G1PQ6ZSU1 146 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 CFAP54Q96N23 3096 aa6.87□□□□□ -1.31
CRNKL1-202ENST00000377340 FCN1O00602 326 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 ZNF134P52741 427 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 MLANAQ16655 118 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 NHLRC2Q8NBF2 726 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 LHFPL5Q8TAF8 219 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 OR51M1Q9H341 326 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 GPX1P07203 203 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 SFTA3P0C7M3 94 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 NTF3P20783 257 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 ZP3P21754 424 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 MFAP2P55001 183 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 PAX8Q06710 450 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 PQLC2Q6ZP29 291 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 DTX2Q86UW9 622 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 ZNF439Q8NDP4 499 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms