RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ZNF580Q9UK33 172 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 WDR83OSQ9Y284 106 aa8.21□□□□□ -1.1
PDPN-203ENST00000376061 I3L2K1 104 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 AP4M1O00189 453 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 SOX15O60248 233 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 IFNA7P01567 189 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 IGHV3-48P01763 117 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 SPP1P10451 314 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 PF4V1P10720 104 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 AKR1C1Q04828 323 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 GAMTQ14353 236 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 MLANAQ16655 118 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 FAM74A1Q5RGS3 127 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 ZNF767PQ75MW2 155 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 SCGB1C1Q8TD33 95 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 CACNG8Q8WXS5 425 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 TAF15Q92804 592 aaKnown RBP eCLIP8.2□□□□□ -1.1
PDPN-203ENST00000376061 SLC35E1Q96K37 410 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 TMEM68Q96MH6 324 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 RSG1Q9BU20 258 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 SLC25A32Q9H2D1 315 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 MRPL36Q9P0J6 103 aaKnown RBP8.2□□□□□ -1.1
PDPN-203ENST00000376061 LINC00527Q9UJ94 153 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 LSM4Q9Y4Z0 139 aaKnown RBP8.2□□□□□ -1.1
PDPN-203ENST00000376061 RFNGQ9Y644 331 aa8.2□□□□□ -1.1
PDPN-203ENST00000376061 FN1P02751 2386 aaKnown RBP8.19□□□□□ -1.1
PDPN-203ENST00000376061 RPS10-NUDT3A0A1W2PQS6 291 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 CLDN34H7C241 214 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 TRIM77I1YAP6 450 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 K7EIM0 57 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 MT-CO2P00403 227 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 KLK9Q2XQG4 91 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 BTNL8Q6UX41 500 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 OR2T6Q8NHC8 308 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 ZNF418Q8TF45 676 aaPredicted RBP8.19□□□□□ -1.1
PDPN-203ENST00000376061 SCARB1Q8WTV0 552 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 GNPNAT1Q96EK6 184 aaPredicted RBP8.19□□□□□ -1.1
PDPN-203ENST00000376061 ACY3Q96HD9 319 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 NOL4LQ96MY1 436 aaPredicted RBP8.19□□□□□ -1.1
PDPN-203ENST00000376061 NPCDR1Q9BY65 106 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 PRSS22Q9GZN4 317 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 UBQLN2Q9UHD9 624 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 KLK9Q9UKQ9 250 aa8.19□□□□□ -1.1
PDPN-203ENST00000376061 IGKV1OR2-108A0A075B7D4 117 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 IGHV3-21A0A0B4J1V1 117 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 CYB5BO43169 146 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 MPDU1O75352 247 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 TSPAN9O75954 239 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 SEC11BP0C7V7 166 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 HIST1H1BP16401 226 aaKnown RBP8.18□□□□□ -1.1
PDPN-203ENST00000376061 RND2P52198 227 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 HILS1P60008 231 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 DEFA5Q01523 94 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 CFHR3Q02985 330 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 ETFRF1Q6IPR1 90 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 EIF5AL1Q6IS14 154 aaKnown RBP8.18□□□□□ -1.1
PDPN-203ENST00000376061 TMEM144Q7Z5S9 345 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 Q8N2B8 174 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 MGST2Q99735 147 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 PSMG3Q9BT73 122 aaPredicted RBP8.18□□□□□ -1.1
PDPN-203ENST00000376061 GGTLC1Q9BX51 225 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 NPVFQ9HCQ7 196 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 TIMM9Q9Y5J7 89 aa8.18□□□□□ -1.1
PDPN-203ENST00000376061 TRBV9A0A0B4J1U6 114 aa8.17□□□□□ -1.1
PDPN-203ENST00000376061 MFSD2BA6NFX1 497 aa8.17□□□□□ -1.1
PDPN-203ENST00000376061 OR2J3O76001 311 aa8.17□□□□□ -1.1
PDPN-203ENST00000376061 NDUFB8O95169 186 aa8.17□□□□□ -1.1
PDPN-203ENST00000376061 RNASE1P07998 156 aaKnown RBP8.17□□□□□ -1.1
PDPN-203ENST00000376061 FAM157CP0CG43 387 aa8.17□□□□□ -1.1
PDPN-203ENST00000376061 PPIFP30405 207 aaKnown RBP8.17□□□□□ -1.1
PDPN-203ENST00000376061 RHOGP84095 191 aa8.17□□□□□ -1.1
PDPN-203ENST00000376061 TEPPQ6URK8 271 aa8.17□□□□□ -1.1
PDPN-203ENST00000376061 TMEM182Q6ZP80 229 aaPredicted RBP8.17□□□□□ -1.1
PDPN-203ENST00000376061 CENPVQ7Z7K6 275 aaPredicted RBP8.17□□□□□ -1.1
PDPN-203ENST00000376061 THAP8Q8NA92 274 aa8.17□□□□□ -1.1
PDPN-203ENST00000376061 NPIPB3Q92617 1050 aa8.17□□□□□ -1.1
PDPN-203ENST00000376061 FBXL7Q9UJT9 491 aa8.17□□□□□ -1.1
PDPN-203ENST00000376061 IGKV1D-37A0A075B6S9 117 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 H3BUA1 57 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 AGPAT2O15120 278 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 OR10J1P30954 320 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 CAMLGP49069 296 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 XP32Q5T750 250 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 ACSM6Q6P461 480 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 NECAP1Q8NC96 275 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 TMEM116Q8NCL8 245 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 OR2G3Q8NGZ4 309 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 OR4X1Q8NH49 305 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 ZNF355PQ9NSJ1 428 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 THYN1Q9P016 225 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 S4R3C0 116 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 CUBNO60494 3623 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 NF1P21359 2839 aa8.16□□□□□ -1.1
PDPN-203ENST00000376061 C17orf112F2Z3M2 114 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 F8W735 103 aaPredicted RBP8.15□□□□□ -1.1
PDPN-203ENST00000376061 CRLF1O75462 422 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 BRI3O95415 125 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 IGLV1-40P01703 118 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 TRGV3P03979 118 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 SULT1A2P50226 295 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms