RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 PLCE1Q9P212 2302 aa13.95□□□□□ -0.18
VARS-215ENST00000375663 FAM27E3Q08E93 113 aa13.95□□□□□ -0.18
VARS-215ENST00000375663 MYOZ3Q8TDC0 251 aa13.95□□□□□ -0.18
VARS-215ENST00000375663 RAB37Q96AX2 223 aa13.95□□□□□ -0.18
VARS-215ENST00000375663 METRNQ9UJH8 293 aa13.95□□□□□ -0.18
VARS-215ENST00000375663 BMI1P35226 326 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 SCGB1D4Q6XE38 83 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 A6NNC1 897 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 CD69Q07108 199 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 RPP21Q9H633 154 aaKnown RBP13.94□□□□□ -0.18
VARS-215ENST00000375663 TICRRQ7Z2Z1 1910 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 FOXI3A8MTJ6 420 aaPredicted RBP13.94□□□□□ -0.18
VARS-215ENST00000375663 TMEM105Q8N8V8 129 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 CHODLQ9H9P2 273 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 TRAV3A0A0B4J244 114 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 CCL3L1P16619 93 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 NTF4P34130 210 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 PRCDQ00LT1 54 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 ZNF726P1Q15940 193 aa13.94□□□□□ -0.18
VARS-215ENST00000375663 RNASEH2CQ8TDP1 164 aaKnown RBP13.94□□□□□ -0.18
VARS-215ENST00000375663 A8MWP6 167 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 SP9P0CG40 484 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 SELLP14151 372 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 SPANXN1Q5VSR9 72 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 TCF24Q7RTU0 167 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 COQ2Q96H96 371 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 ZNF106Q9H2Y7 1883 aaKnown RBP13.93□□□□□ -0.18
VARS-215ENST00000375663 GNG5P63218 68 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 ECSCRQ19T08 205 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 Q1RN00 199 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 GUCD1Q96NT3 240 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 PROK2Q9HC23 129 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 SRRM5B3KS81 715 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 CCDC144NLQ6NUI1 221 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 PLA2G2EQ9NZK7 142 aa13.93□□□□□ -0.18
VARS-215ENST00000375663 A0A1B0GUT8 65 aa13.92□□□□□ -0.18
VARS-215ENST00000375663 IL4P05112 153 aa13.92□□□□□ -0.18
VARS-215ENST00000375663 CD40P25942 277 aa13.92□□□□□ -0.18
VARS-215ENST00000375663 TMEM136Q6ZRR5 245 aa13.92□□□□□ -0.18
VARS-215ENST00000375663 IGKV1-39P01597 117 aa13.92□□□□□ -0.18
VARS-215ENST00000375663 IGKV1D-39P04432 117 aa13.92□□□□□ -0.18
VARS-215ENST00000375663 C9JCJ5 164 aa13.92□□□□□ -0.18
VARS-215ENST00000375663 GCSHP23434 173 aa13.92□□□□□ -0.18
VARS-215ENST00000375663 OR10J3Q5JRS4 329 aa13.92□□□□□ -0.18
VARS-215ENST00000375663 MBNL3Q9NUK0 354 aaKnown RBP13.92□□□□□ -0.18
VARS-215ENST00000375663 LINC00312Q9Y6C7 94 aa13.92□□□□□ -0.18
VARS-215ENST00000375663 IGKV3-7A0A075B6H7 116 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 SNAI2O43623 268 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 ARF6P62330 175 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 PRR7Q8TB68 274 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 GFRA3O60609 400 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 CSPG4Q6UVK1 2322 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 MFAP4P55083 255 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 ZNF788Q6ZQV5 615 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 RBPMS2Q6ZRY4 209 aaKnown RBP13.91□□□□□ -0.18
VARS-215ENST00000375663 TRAV9-2A0A087WT02 112 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 FOXH1O75593 365 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 OR10W1Q8NGF6 305 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 CLEC7AQ9BXN2 247 aa13.91□□□□□ -0.18
VARS-215ENST00000375663 PPIAL4CA0A0B4J2A2 164 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 EREGO14944 169 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 ZNF207O43670 478 aaKnown RBP13.9□□□□□ -0.18
VARS-215ENST00000375663 IGKV1D-33P01593 117 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 IGKV1-33P01594 117 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 APOHP02749 345 aaPredicted RBP13.9□□□□□ -0.18
VARS-215ENST00000375663 PPIAL4GP0DN37 164 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 FABP2P12104 132 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 SOX21Q9Y651 276 aaPredicted RBP13.9□□□□□ -0.18
VARS-215ENST00000375663 TRAV5A0A0B4J249 113 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 A0A1B0GUS0 222 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 SRSF9Q13242 221 aaKnown RBP eCLIP13.9□□□□□ -0.18
VARS-215ENST00000375663 CD177Q8N6Q3 437 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 FBXL15Q9H469 300 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 FREM1Q5H8C1 2179 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 WDR87Q6ZQQ6 2873 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 IGHV1-18A0A0C4DH31 117 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 RPL7P18124 248 aaKnown RBP13.9□□□□□ -0.18
VARS-215ENST00000375663 ANOS1P23352 680 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 ERASQ7Z444 233 aa13.9□□□□□ -0.18
VARS-215ENST00000375663 DLEU1O43261 78 aa13.89□□□□□ -0.19
VARS-215ENST00000375663 MEF2CQ06413 473 aaPredicted RBP13.89□□□□□ -0.19
VARS-215ENST00000375663 SSC4DQ8WTU2 575 aa13.89□□□□□ -0.19
VARS-215ENST00000375663 MAP1LC3AQ9H492 121 aa13.89□□□□□ -0.19
VARS-215ENST00000375663 EPDR1Q9UM22 224 aa13.89□□□□□ -0.19
VARS-215ENST00000375663 F2RL2O00254 374 aa13.89□□□□□ -0.19
VARS-215ENST00000375663 Q9H3A6 140 aa13.89□□□□□ -0.19
VARS-215ENST00000375663 F11RQ9Y624 299 aaKnown RBP13.89□□□□□ -0.19
VARS-215ENST00000375663 AREGP15514 252 aa13.89□□□□□ -0.19
VARS-215ENST00000375663 MBNL2Q5VZF2 373 aaKnown RBP13.89□□□□□ -0.19
VARS-215ENST00000375663 ZNF841Q6ZN19 808 aa13.89□□□□□ -0.19
VARS-215ENST00000375663 IGHV3-35A0A0C4DH35 117 aa13.89□□□□□ -0.19
VARS-215ENST00000375663 PMCHL2Q9BQD1 86 aa13.89□□□□□ -0.19
VARS-215ENST00000375663 PEF1Q9UBV8 284 aaKnown RBP13.89□□□□□ -0.19
VARS-215ENST00000375663 PLP1P60201 277 aa13.88□□□□□ -0.19
VARS-215ENST00000375663 FMC1Q96HJ9 113 aa13.88□□□□□ -0.19
VARS-215ENST00000375663 FOXA2Q9Y261 457 aaPredicted RBP13.88□□□□□ -0.19
VARS-215ENST00000375663 TMEM78Q5T7P6 136 aa13.88□□□□□ -0.19
VARS-215ENST00000375663 RALYQ9UKM9 306 aaKnown RBP13.88□□□□□ -0.19
VARS-215ENST00000375663 TRAV30A0A087WSZ9 112 aa13.88□□□□□ -0.19
VARS-215ENST00000375663 TCRBV4S1A1TA0A5B7 111 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 331.3 ms