RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 SEPSECSQ9HD40 501 aaKnown RBP7□□□□□ -1.29
SNRNP40-202ENST00000373720 TNFRSF19Q9NS68 423 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 TMEM14CQ9P0S9 112 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 ONECUT1Q9UBC0 465 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 PRR14LQ5THK1 2151 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 SERTM2A0A1B0GWG4 89 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 PSMB11A5LHX3 300 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 OVOL3O00110 214 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 ISLRO14498 428 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 HYPMO75409 117 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 NDUFB4O95168 129 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 MT-ND6P03923 174 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 HOXA5P20719 270 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 PLA2G5P39877 138 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 CDX1P47902 265 aaPredicted RBP6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 PDLIM4P50479 330 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 GNB1P62873 340 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 KIAA0141Q14154 515 aaPredicted RBP6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 PLGLAQ15195 96 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 TNXAQ16473 311 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 ZNF674Q2M3X9 581 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 COA6Q5JTJ3 125 aaKnown RBP6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 SRSF12Q8WXF0 261 aaKnown RBP6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 OR51M1Q9H341 326 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 OSTCQ9NRP0 149 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 CDC42EP3Q9UKI2 254 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 ANKHD1Q8IWZ3 2542 aaKnown RBP6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 TLN1Q9Y490 2541 aaKnown RBP6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 AKAP13Q12802 2813 aa6.99□□□□□ -1.29
SNRNP40-202ENST00000373720 ARFGEF3Q5TH69 2177 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 TRBV6-1A0A0K0K1D8 114 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 CGB1A6NKQ9 187 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 OR7C2O60412 319 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 CNIH1O95406 144 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 SOD3P08294 240 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 GATA3P23771 443 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 REG1BP48304 166 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 GNG4P50150 75 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 CNN1P51911 297 aaKnown RBP6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 YPEL3P61236 119 aaPredicted RBP6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 MRGPRG-AS1Q2M3A8 158 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 UTF1Q5T230 341 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 FAM231DQ6ZW35 169 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 TTC9CQ8N5M4 171 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 OR10W1Q8NGF6 305 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 OR10G8Q8NGN5 311 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 CFHR4Q92496 578 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 NPIPB3Q92617 1050 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 PAXXQ9BUH6 204 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 FRYQ5TBA9 3013 aa6.98□□□□□ -1.29
SNRNP40-202ENST00000373720 CEP295Q9C0D2 2601 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 LOC400499M0QZD8 3231 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 IGKV1OR2-108A0A075B7D4 117 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 IGHV2-70DA0A0C4DH43 119 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 BRI3O95415 125 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 DEFA4P12838 97 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 PAX1P15863 534 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 GRNP28799 593 aaKnown RBP6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 S100A2P29034 98 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 AKR1C3P42330 323 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 SNRPEP62304 92 aaKnown RBP6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 FABP9Q0Z7S8 132 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 PDE6HQ13956 83 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 MMDQ15546 238 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 C5orf64Q2M2E5 130 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 FAM209BQ5JX69 171 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 WDR73Q6P4I2 378 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 C16orf82Q7Z2V1 217 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 TMEM37Q8WXS4 190 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 RASL11BQ9BPW5 248 aa6.97□□□□□ -1.29
SNRNP40-202ENST00000373720 PIEZO1Q92508 2521 aa6.96□□□□□ -1.29
SNRNP40-202ENST00000373720 FAM231BA6NCW3 169 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 TEX22C9J3V5 150 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 K7EQM0 130 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 TIMM23O14925 209 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 GCGP01275 180 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 HLA-DRB1P01911 266 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 COL8A1P27658 744 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 ATP5G3P48201 142 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 MEOX2P50222 304 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 ARF6P62330 175 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 UBE2L3P68036 154 aaKnown RBP6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 GCSAMLQ5JQS6 135 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 TEX38Q6PEX7 206 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 MIR17HGQ75NE6 70 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 VMO1Q7Z5L0 202 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 Q8N6K4 173 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 VN1R17PQ8TDU5 208 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 C2CD4CQ8TF44 421 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 EAF1Q96JC9 268 aaPredicted RBP6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 FAM167A-AS1Q96KT0 104 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 PACRGQ96M98 296 aaPredicted RBP6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 SIRPDQ9H106 197 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 FNDC4Q9H6D8 234 aaPredicted RBP6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 IL36BQ9NZH7 164 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 HIGD1AQ9Y241 93 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 KLF12Q9Y4X4 402 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 SOX21Q9Y651 276 aaPredicted RBP6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 ZFHX4Q86UP3 3567 aa6.96□□□□□ -1.3
SNRNP40-202ENST00000373720 IGKV1D-37A0A075B6S9 117 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms