RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 MANBALQ9NQG1 85 aa13.19□□□□□ -0.3
SCP2-201ENST00000371509 CUBNO60494 3623 aa13.18□□□□□ -0.3
SCP2-201ENST00000371509 CNTFRP26992 372 aa13.18□□□□□ -0.3
SCP2-201ENST00000371509 CDC34P49427 236 aaPredicted RBP13.18□□□□□ -0.3
SCP2-201ENST00000371509 SUB1P53999 127 aaKnown RBP eCLIP13.18□□□□□ -0.31e-10■■■■■ 39.9
SCP2-201ENST00000371509 HABP2Q14520 560 aaPredicted RBP13.18□□□□□ -0.3
SCP2-201ENST00000371509 CCDC144NLQ6NUI1 221 aa13.18□□□□□ -0.3
SCP2-201ENST00000371509 MMD2Q8IY49 270 aa13.18□□□□□ -0.3
SCP2-201ENST00000371509 RNF5Q99942 180 aa13.18□□□□□ -0.3
SCP2-201ENST00000371509 SIGLEC9Q9Y336 463 aa13.18□□□□□ -0.3
SCP2-201ENST00000371509 PXMP4Q9Y6I8 212 aa13.18□□□□□ -0.3
SCP2-201ENST00000371509 A0A1W2PPV4 95 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 OOSP1A8MZH6 123 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 INAFM1C9JVW0 142 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 EIF3GO75821 320 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCP2-201ENST00000371509 FBP1P09467 338 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 HNF1AP20823 631 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 MAS1LP35410 378 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 PSMB3P49720 205 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 BPIFB3P59826 476 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 AWAT1Q58HT5 328 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 MIC13Q5XKP0 118 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 TMEM88Q6PEY1 159 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 ZNF48Q96MX3 618 aaPredicted RBP13.17□□□□□ -0.3
SCP2-201ENST00000371509 RPS10P5Q9NQ39 176 aa13.17□□□□□ -0.3
SCP2-201ENST00000371509 VENTXO95231 258 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 ATF4P18848 351 aaPredicted RBP13.16□□□□□ -0.3
SCP2-201ENST00000371509 CD69Q07108 199 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 GCSAMLQ5JQS6 135 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 C9orf139Q6ZV77 190 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 TMEM144Q7Z5S9 345 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 TEX29Q8N6K0 151 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 CYB561D1Q8N8Q1 229 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 NIPSNAP3BQ9BS92 247 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 MEGF9Q9H1U4 602 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 TMEM160Q9NX00 188 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 IGLC7A0M8Q6 106 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 SNRNP70P08621 437 aaKnown RBP13.16□□□□□ -0.3
SCP2-201ENST00000371509 DEFA4P12838 97 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 RPL29P47914 159 aaKnown RBP13.16□□□□□ -0.3
SCP2-201ENST00000371509 CBLN2Q8IUK8 224 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 CACNG8Q8WXS5 425 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 SSX3Q99909 188 aa13.16□□□□□ -0.3
SCP2-201ENST00000371509 MXRA5Q9NR99 2828 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 C7orf77A4D0Y5 90 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 ACTL6BO94805 426 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 GPX4P36969 197 aaPredicted RBP13.15□□□□□ -0.3
SCP2-201ENST00000371509 COMPP49747 757 aaPredicted RBP13.15□□□□□ -0.3
SCP2-201ENST00000371509 CEBPGP53567 150 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 PRR20EP86478 221 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 PRR20CP86479 221 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 PRR20DP86480 221 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 PRR20BP86481 221 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 PRR20AP86496 221 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 HES1Q14469 280 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 AKIRIN2Q53H80 203 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 PVRIGQ6DKI7 326 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 STPG3Q8N7X2 389 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 RNASEH2CQ8TDP1 164 aaKnown RBP13.15□□□□□ -0.3
SCP2-201ENST00000371509 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
SCP2-201ENST00000371509 PUS1Q9Y606 427 aaKnown RBP eCLIP13.15□□□□□ -0.3
SCP2-201ENST00000371509 HMGB3O15347 200 aaKnown RBP13.14□□□□□ -0.31
SCP2-201ENST00000371509 RPL27AP46776 148 aaKnown RBP13.14□□□□□ -0.31
SCP2-201ENST00000371509 GAMTQ14353 236 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 SLC16A13Q7RTY0 426 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 SLC35E3Q7Z769 313 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 C15orf54Q8N8G6 183 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 ZNF114Q8NC26 417 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 SSMEM1Q8WWF3 244 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 METTL1Q9UBP6 276 aaKnown RBP13.14□□□□□ -0.31
SCP2-201ENST00000371509 F8P00451 2351 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 IGKV1OR2-108A0A075B7D4 117 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 H3BQ15 152 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 B2MP61769 119 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 SSBP2P81877 361 aaPredicted RBP13.14□□□□□ -0.31
SCP2-201ENST00000371509 FAM90A2PQ658T7 463 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 PPP1R27Q86WC6 154 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 PIFOQ8TCI5 191 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 TVP23CQ96ET8 276 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 TMPRSS5Q9H3S3 457 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 TNFRSF19Q9NS68 423 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 SLC45A2Q9UMX9 530 aa13.14□□□□□ -0.31
SCP2-201ENST00000371509 H3BUX3 64 aa13.13□□□□□ -0.31
SCP2-201ENST00000371509 LINC00869P0C866 280 aa13.13□□□□□ -0.31
SCP2-201ENST00000371509 SRD5A1P18405 259 aa13.13□□□□□ -0.31
SCP2-201ENST00000371509 BRS3P32247 399 aa13.13□□□□□ -0.31
SCP2-201ENST00000371509 MEF2BQ02080 365 aaPredicted RBP13.13□□□□□ -0.31
SCP2-201ENST00000371509 PNRC1Q12796 327 aaPredicted RBP13.13□□□□□ -0.31
SCP2-201ENST00000371509 TNXAQ16473 311 aa13.13□□□□□ -0.31
SCP2-201ENST00000371509 CDC42EP3Q9UKI2 254 aa13.13□□□□□ -0.31
SCP2-201ENST00000371509 HIVEP2P31629 2446 aa13.12□□□□□ -0.31
SCP2-201ENST00000371509 B4DEV8 164 aa13.12□□□□□ -0.31
SCP2-201ENST00000371509 TSPAN9O75954 239 aa13.12□□□□□ -0.31
SCP2-201ENST00000371509 MT-CO2P00403 227 aa13.12□□□□□ -0.31
SCP2-201ENST00000371509 LY6EQ16553 131 aa13.12□□□□□ -0.31
SCP2-201ENST00000371509 SIGLECL1Q8N7X8 197 aa13.12□□□□□ -0.31
SCP2-201ENST00000371509 EAF1Q96JC9 268 aaPredicted RBP13.12□□□□□ -0.31
SCP2-201ENST00000371509 SLC35E1Q96K37 410 aa13.12□□□□□ -0.31
SCP2-201ENST00000371509 FBXL15Q9H469 300 aa13.12□□□□□ -0.31
SCP2-201ENST00000371509 TMEM250H0YL14 139 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms