RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 ZNF436Q9C0F3 470 aaPredicted RBP11.45□□□□□ -0.58
SS18L1-202ENST00000370848 C20orf85Q9H1P6 137 aa11.45□□□□□ -0.58
SS18L1-202ENST00000370848 RBKSQ9H477 322 aa11.45□□□□□ -0.58
SS18L1-202ENST00000370848 FNDC4Q9H6D8 234 aaPredicted RBP11.45□□□□□ -0.58
SS18L1-202ENST00000370848 ZMAT4Q9H898 229 aa11.45□□□□□ -0.58
SS18L1-202ENST00000370848 HEYLQ9NQ87 328 aaPredicted RBP11.45□□□□□ -0.58
SS18L1-202ENST00000370848 HSPB7Q9UBY9 170 aa11.45□□□□□ -0.58
SS18L1-202ENST00000370848 DUXBA0A1W2PPF3 345 aa11.44□□□□□ -0.58
SS18L1-202ENST00000370848 PITX3O75364 302 aa11.44□□□□□ -0.58
SS18L1-202ENST00000370848 ADAP1O75689 374 aa11.44□□□□□ -0.58
SS18L1-202ENST00000370848 CTSGP08311 255 aa11.44□□□□□ -0.58
SS18L1-202ENST00000370848 IGHV4-30-4P0DP06 118 aa11.44□□□□□ -0.58
SS18L1-202ENST00000370848 FOLR2P14207 255 aa11.44□□□□□ -0.58
SS18L1-202ENST00000370848 MFAP4P55083 255 aa11.44□□□□□ -0.58
SS18L1-202ENST00000370848 UBE2MP61081 183 aaKnown RBP11.44□□□□□ -0.58
SS18L1-202ENST00000370848 IFITM3Q01628 133 aa11.44□□□□□ -0.58
SS18L1-202ENST00000370848 FAM106AQ4KMX7 169 aa11.44□□□□□ -0.58
SS18L1-202ENST00000370848 GGNBP1Q5YKI7 109 aa11.44□□□□□ -0.58
SS18L1-202ENST00000370848 LYG2Q86SG7 212 aa11.44□□□□□ -0.58
SS18L1-202ENST00000370848 TRAV6A0A075B6T7 132 aa11.43□□□□□ -0.58
SS18L1-202ENST00000370848 A0A1B0GU03 582 aa11.43□□□□□ -0.58
SS18L1-202ENST00000370848 MPTX1A8MV57 137 aa11.43□□□□□ -0.58
SS18L1-202ENST00000370848 A8MWP6 167 aa11.43□□□□□ -0.58
SS18L1-202ENST00000370848 TCRBP04435 133 aa11.43□□□□□ -0.58
SS18L1-202ENST00000370848 ZNF846Q147U1 533 aa11.43□□□□□ -0.58
SS18L1-202ENST00000370848 CD300EQ496F6 205 aaPredicted RBP11.43□□□□□ -0.58
SS18L1-202ENST00000370848 C4orf46Q504U0 113 aa11.43□□□□□ -0.58
SS18L1-202ENST00000370848 SLC24A4Q8NFF2 622 aa11.43□□□□□ -0.58
SS18L1-202ENST00000370848 TMEM190Q8WZ59 177 aa11.43□□□□□ -0.58
SS18L1-202ENST00000370848 WDR12Q9GZL7 423 aaKnown RBP11.43□□□□□ -0.58
SS18L1-202ENST00000370848 LCE6AA0A183 80 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 ZNF207O43670 478 aaKnown RBP11.42□□□□□ -0.58
SS18L1-202ENST00000370848 IAPPP10997 89 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 LYL1P12980 280 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 CBLN1P23435 193 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 FCGR2BP31994 310 aaPredicted RBP11.42□□□□□ -0.58
SS18L1-202ENST00000370848 OPRK1P41145 380 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 HTR2BP41595 481 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 SUB1P53999 127 aaKnown RBP eCLIP11.42□□□□□ -0.58
SS18L1-202ENST00000370848 C2orf83Q53S99 150 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 SPSB3Q6PJ21 355 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 UXS1Q8NBZ7 420 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 DTD1Q8TEA8 209 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 DYNLRB2Q8TF09 96 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 ATP6V0BQ99437 205 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 NUDT15Q9NV35 164 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 MLXQ9UH92 298 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 TMED3Q9Y3Q3 217 aa11.42□□□□□ -0.58
SS18L1-202ENST00000370848 PLECQ15149 4684 aaKnown RBP11.42□□□□□ -0.58
SS18L1-202ENST00000370848 GNG7O60262 68 aa11.41□□□□□ -0.58
SS18L1-202ENST00000370848 UPK1BO75841 260 aa11.41□□□□□ -0.58
SS18L1-202ENST00000370848 NPY1RP25929 384 aa11.41□□□□□ -0.58
SS18L1-202ENST00000370848 DEFB114Q30KQ6 69 aa11.41□□□□□ -0.58
SS18L1-202ENST00000370848 BTNL8Q6UX41 500 aa11.41□□□□□ -0.58
SS18L1-202ENST00000370848 SEC22CQ9BRL7 303 aa11.41□□□□□ -0.58
SS18L1-202ENST00000370848 C20orf24Q9BUV8 137 aa11.41□□□□□ -0.58
SS18L1-202ENST00000370848 MAGT1Q9H0U3 335 aa11.41□□□□□ -0.58
SS18L1-202ENST00000370848 HYDINQ4G0P3 5121 aa11.4□□□□□ -0.58
SS18L1-202ENST00000370848 CORTO00230 105 aa11.4□□□□□ -0.58
SS18L1-202ENST00000370848 NDUFA4O00483 81 aa11.4□□□□□ -0.58
SS18L1-202ENST00000370848 NUPL2O15504 423 aaKnown RBP11.4□□□□□ -0.58
SS18L1-202ENST00000370848 SLC25A6P12236 298 aa11.4□□□□□ -0.58
SS18L1-202ENST00000370848 ASAH1Q13510 395 aa11.4□□□□□ -0.58
SS18L1-202ENST00000370848 DUSP18Q8NEJ0 188 aa11.4□□□□□ -0.58
SS18L1-202ENST00000370848 OR2K2Q8NGT1 345 aa11.4□□□□□ -0.58
SS18L1-202ENST00000370848 COQ8AQ8NI60 647 aa11.4□□□□□ -0.58
SS18L1-202ENST00000370848 WDR89Q96FK6 387 aaPredicted RBP11.4□□□□□ -0.58
SS18L1-202ENST00000370848 TXN2Q99757 166 aa11.4□□□□□ -0.58
SS18L1-202ENST00000370848 HIPK2Q9H2X6 1198 aa11.4□□□□□ -0.58
SS18L1-202ENST00000370848 UFC1Q9Y3C8 167 aa11.4□□□□□ -0.58
SS18L1-202ENST00000370848 FAM240BA0A1B0GVZ2 78 aa11.39□□□□□ -0.59
SS18L1-202ENST00000370848 ZNF785A8K8V0 405 aa11.39□□□□□ -0.59
SS18L1-202ENST00000370848 TMEM50AO95807 157 aa11.39□□□□□ -0.59
SS18L1-202ENST00000370848 IFNA10P01566 189 aa11.39□□□□□ -0.59
SS18L1-202ENST00000370848 C8orf88P0DMB2 117 aa11.39□□□□□ -0.59
SS18L1-202ENST00000370848 NPBWR1P48145 328 aa11.39□□□□□ -0.59
SS18L1-202ENST00000370848 LCN12Q6JVE5 192 aa11.39□□□□□ -0.59
SS18L1-202ENST00000370848 LINC00322Q6ZN03 302 aaPredicted RBP11.39□□□□□ -0.59
SS18L1-202ENST00000370848 TMEM61Q8N0U2 210 aa11.39□□□□□ -0.59
SS18L1-202ENST00000370848 PALMDQ9NP74 551 aa11.39□□□□□ -0.59
SS18L1-202ENST00000370848 GAR1Q9NY12 217 aaKnown RBP11.39□□□□□ -0.59
SS18L1-202ENST00000370848 IGHV3-49A0A0A0MS15 119 aa11.38□□□□□ -0.59
SS18L1-202ENST00000370848 PIGBOS1A0A0B4J2F0 54 aa11.38□□□□□ -0.59
SS18L1-202ENST00000370848 CCSO14618 274 aa11.38□□□□□ -0.59
SS18L1-202ENST00000370848 CLN5O75503 358 aa11.38□□□□□ -0.59
SS18L1-202ENST00000370848 YIF1AO95070 293 aa11.38□□□□□ -0.59
SS18L1-202ENST00000370848 H2AFB2P0C5Z0 115 aa11.38□□□□□ -0.59
SS18L1-202ENST00000370848 RELQ04864 619 aaPredicted RBP11.38□□□□□ -0.59
SS18L1-202ENST00000370848 PRSS54Q6PEW0 395 aa11.38□□□□□ -0.59
SS18L1-202ENST00000370848 OR4X1Q8NH49 305 aa11.38□□□□□ -0.59
SS18L1-202ENST00000370848 MITD1Q8WV92 249 aa11.38□□□□□ -0.59
SS18L1-202ENST00000370848 SPATA25Q9BR10 227 aa11.38□□□□□ -0.59
SS18L1-202ENST00000370848 DAZ1Q9NQZ3 744 aaKnown RBP11.38□□□□□ -0.59
SS18L1-202ENST00000370848 TECRQ9NZ01 308 aaKnown RBP11.38□□□□□ -0.59
SS18L1-202ENST00000370848 CACFD1Q9UGQ2 172 aa11.38□□□□□ -0.59
SS18L1-202ENST00000370848 C15orf62A8K5M9 175 aa11.37□□□□□ -0.59
SS18L1-202ENST00000370848 FAM90A26D6RGX4 464 aa11.37□□□□□ -0.59
SS18L1-202ENST00000370848 RND2P52198 227 aa11.37□□□□□ -0.59
SS18L1-202ENST00000370848 ELLP55199 621 aaPredicted RBP11.37□□□□□ -0.59
SS18L1-202ENST00000370848 GUCA2BQ16661 112 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms