RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 LHFPL1Q86WI0 220 aa16.28■□□□□ 0.2
LMO4-202ENST00000370544 TBL2Q9Y4P3 447 aaKnown RBP16.28■□□□□ 0.2
LMO4-202ENST00000370544 DMRT1Q9Y5R6 373 aa16.28■□□□□ 0.2
LMO4-202ENST00000370544 HIGD1CA8MV81 97 aa16.28■□□□□ 0.2
LMO4-202ENST00000370544 TMEM101Q96IK0 257 aa16.28■□□□□ 0.2
LMO4-202ENST00000370544 TRAV40A0A0B4J280 105 aa16.27■□□□□ 0.2
LMO4-202ENST00000370544 PSPNO60542 156 aa16.27■□□□□ 0.2
LMO4-202ENST00000370544 CD177Q8N6Q3 437 aa16.27■□□□□ 0.2
LMO4-202ENST00000370544 C5orf63A6NC05 138 aa16.27■□□□□ 0.2
LMO4-202ENST00000370544 OR11H12B2RN74 326 aa16.27■□□□□ 0.2
LMO4-202ENST00000370544 C1QTNF9BB2RNN3 333 aa16.27■□□□□ 0.2
LMO4-202ENST00000370544 OR11H1Q8NG94 326 aa16.27■□□□□ 0.2
LMO4-202ENST00000370544 OR11H2Q8NH07 326 aa16.27■□□□□ 0.2
LMO4-202ENST00000370544 RNASE7Q9H1E1 156 aaKnown RBP16.27■□□□□ 0.2
LMO4-202ENST00000370544 TMEM170BQ5T4T1 132 aa16.27■□□□□ 0.19
LMO4-202ENST00000370544 TMEM200BQ69YZ2 307 aa16.27■□□□□ 0.19
LMO4-202ENST00000370544 THADAQ6YHU6 1953 aa16.27■□□□□ 0.19
LMO4-202ENST00000370544 RALGAPA1Q6GYQ0 2036 aa16.27■□□□□ 0.19
LMO4-202ENST00000370544 EPDR1Q9UM22 224 aa16.27■□□□□ 0.19
LMO4-202ENST00000370544 CACNA1EQ15878 2313 aa16.26■□□□□ 0.19
LMO4-202ENST00000370544 K7ERU9 68 aa16.26■□□□□ 0.19
LMO4-202ENST00000370544 SRSF3P84103 164 aaKnown RBP16.26■□□□□ 0.19
LMO4-202ENST00000370544 ASXL3Q9C0F0 2248 aa16.26■□□□□ 0.19
LMO4-202ENST00000370544 A0A0G2JNJ9 132 aa16.26■□□□□ 0.19
LMO4-202ENST00000370544 FAM71F2Q6NXP2 309 aa16.26■□□□□ 0.19
LMO4-202ENST00000370544 OR10W1Q8NGF6 305 aa16.26■□□□□ 0.19
LMO4-202ENST00000370544 Q9UFV3 132 aa16.26■□□□□ 0.19
LMO4-202ENST00000370544 RLFQ13129 1914 aa16.26■□□□□ 0.19
LMO4-202ENST00000370544 TMEM178BH3BS89 294 aa16.26■□□□□ 0.19
LMO4-202ENST00000370544 EFNB3Q15768 340 aa16.26■□□□□ 0.19
LMO4-202ENST00000370544 SRSF6Q13247 344 aaKnown RBP16.26■□□□□ 0.19
LMO4-202ENST00000370544 WDR83OSQ9Y284 106 aa16.26■□□□□ 0.19
LMO4-202ENST00000370544 COL4A6Q14031 1691 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 SCGB3A1Q96QR1 104 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 IGHV1-8P0DP01 117 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 HEPN1Q6WQI6 88 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 PLXNA3P51805 1871 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 ATP5LO75964 103 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 EFNA4P52798 201 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 ORMDL3Q8N138 153 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 A0A1W2PRE2 83 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 FABP5P3A8MUU1 101 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 MLNRO43193 412 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 WNT2P09544 360 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 C1QTNF9P0C862 333 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 ATRAIDQ6UW56 229 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 VWA8A3KMH1 1905 aa16.25■□□□□ 0.19
LMO4-202ENST00000370544 GCSAMLQ5JQS6 135 aa16.24■□□□□ 0.19
LMO4-202ENST00000370544 VMO1Q7Z5L0 202 aa16.24■□□□□ 0.19
LMO4-202ENST00000370544 ASCL2Q99929 193 aa16.24■□□□□ 0.19
LMO4-202ENST00000370544 ICE1Q9Y2F5 2266 aa16.24■□□□□ 0.19
LMO4-202ENST00000370544 MBD3L4A6NDZ8 208 aaPredicted RBP16.24■□□□□ 0.19
LMO4-202ENST00000370544 MBD3L3A6NE82 208 aaPredicted RBP16.24■□□□□ 0.19
LMO4-202ENST00000370544 MBD3L5A6NJ08 208 aaPredicted RBP16.24■□□□□ 0.19
LMO4-202ENST00000370544 MBD3L2Q8NHZ7 208 aaPredicted RBP16.24■□□□□ 0.19
LMO4-202ENST00000370544 TRAV8-6A0A0B4J262 113 aa16.24■□□□□ 0.19
LMO4-202ENST00000370544 LDLRAD2Q5SZI1 272 aa16.24■□□□□ 0.19
LMO4-202ENST00000370544 GLMPQ8WWB7 406 aa16.24■□□□□ 0.19
LMO4-202ENST00000370544 FGF16O43320 207 aa16.24■□□□□ 0.19
LMO4-202ENST00000370544 LEPP41159 167 aa16.24■□□□□ 0.19
LMO4-202ENST00000370544 ALKBH7Q9BT30 221 aaPredicted RBP16.24■□□□□ 0.19
LMO4-202ENST00000370544 VSIRQ9H7M9 311 aa16.24■□□□□ 0.19
LMO4-202ENST00000370544 COTL1Q14019 142 aa16.23■□□□□ 0.19
LMO4-202ENST00000370544 TMEM42Q69YG0 159 aa16.23■□□□□ 0.19
LMO4-202ENST00000370544 TMEM167AQ8TBQ9 72 aa16.23■□□□□ 0.19
LMO4-202ENST00000370544 METRNQ9UJH8 293 aa16.23■□□□□ 0.19
LMO4-202ENST00000370544 NAPSAO96009 420 aa16.23■□□□□ 0.19
LMO4-202ENST00000370544 LILRA1O75019 489 aa16.23■□□□□ 0.19
LMO4-202ENST00000370544 SUPT4H1P63272 117 aaKnown RBP16.23■□□□□ 0.19
LMO4-202ENST00000370544 ZNF257Q9Y2Q1 563 aa16.23■□□□□ 0.19
LMO4-202ENST00000370544 IGHG3P01860 377 aa16.23■□□□□ 0.19
LMO4-202ENST00000370544 DSCR9P59020 149 aa16.23■□□□□ 0.19
LMO4-202ENST00000370544 FOXC2Q99958 501 aa16.23■□□□□ 0.19
LMO4-202ENST00000370544 FAM209BQ5JX69 171 aa16.22■□□□□ 0.19
LMO4-202ENST00000370544 TREML4Q6UXN2 200 aa16.22■□□□□ 0.19
LMO4-202ENST00000370544 C8orf46Q8TAG6 207 aa16.22■□□□□ 0.19
LMO4-202ENST00000370544 FAM166AQ6J272 317 aa16.22■□□□□ 0.19
LMO4-202ENST00000370544 C2orf88Q9BSF0 95 aa16.22■□□□□ 0.19
LMO4-202ENST00000370544 MRPS16Q9Y3D3 137 aaKnown RBP16.22■□□□□ 0.19
LMO4-202ENST00000370544 PLP1P60201 277 aa16.22■□□□□ 0.19
LMO4-202ENST00000370544 C10orf55Q5SWW7 151 aa16.22■□□□□ 0.19
LMO4-202ENST00000370544 SDK2Q58EX2 2172 aa16.21■□□□□ 0.19
LMO4-202ENST00000370544 RNASE1P07998 156 aaKnown RBP16.21■□□□□ 0.19
LMO4-202ENST00000370544 PSG8Q9UQ74 426 aa16.21■□□□□ 0.19
LMO4-202ENST00000370544 IGHV1-3A0A0C4DH29 117 aa16.21■□□□□ 0.19
LMO4-202ENST00000370544 CD7P09564 240 aa16.21■□□□□ 0.19
LMO4-202ENST00000370544 GNLYP22749 145 aa16.21■□□□□ 0.19
LMO4-202ENST00000370544 JMJD8Q96S16 334 aa16.21■□□□□ 0.19
LMO4-202ENST00000370544 TCF23Q7RTU1 214 aa16.21■□□□□ 0.19
LMO4-202ENST00000370544 RNF144BQ7Z419 303 aa16.21■□□□□ 0.19
LMO4-202ENST00000370544 TRAV41A0A0B4J266 112 aa16.2■□□□□ 0.18
LMO4-202ENST00000370544 PAX8Q06710 450 aa16.2■□□□□ 0.18
LMO4-202ENST00000370544 MBD3L1Q8WWY6 194 aa16.2■□□□□ 0.18
LMO4-202ENST00000370544 ARHGEF17Q96PE2 2063 aaPredicted RBP16.2■□□□□ 0.18
LMO4-202ENST00000370544 KLRD1Q13241 179 aa16.2■□□□□ 0.18
LMO4-202ENST00000370544 TPTE2P1Q5T6R2 138 aa16.2■□□□□ 0.18
LMO4-202ENST00000370544 Q6ZS92 163 aa16.2■□□□□ 0.18
LMO4-202ENST00000370544 STHQ8IWL8 128 aa16.2■□□□□ 0.18
LMO4-202ENST00000370544 MRAP2Q96G30 205 aa16.2■□□□□ 0.18
LMO4-202ENST00000370544 OSTCQ9NRP0 149 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms