RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 TSPAN13O95857 204 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 IGKV1-13P0DP09 117 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 PAPPA-AS1Q5QFB9 102 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 NEUROG1Q92886 237 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 TRAV41A0A0B4J266 112 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 UPK2O00526 184 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 NMBP08949 121 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 PLP1P60201 277 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 ZNF497Q6ZNH5 498 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 CRIM1Q9NZV1 1036 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 H3BRM9 83 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 H3BUX3 64 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 GPX4P36969 197 aaPredicted RBP7.11□□□□□ -1.27
ABCA4-201ENST00000370225 CD200R1LQ6Q8B3 271 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 SIGLEC15Q6ZMC9 328 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 ZNF525Q8N782 197 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 MRPL16Q9NX20 251 aaKnown RBP7.11□□□□□ -1.27
ABCA4-201ENST00000370225 RNF223E7ERA6 249 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 EFNA4P52798 201 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 FAM209BQ5JX69 171 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 TMEM200BQ69YZ2 307 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 SLC25A34Q6PIV7 304 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 RNF125Q96EQ8 232 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 RNASE7Q9H1E1 156 aaKnown RBP7.11□□□□□ -1.27
ABCA4-201ENST00000370225 SMDT1Q9H4I9 107 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 RPP21Q9H633 154 aaKnown RBP7.11□□□□□ -1.27
ABCA4-201ENST00000370225 IGHV2-26A0A0B4J1V2 119 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 PSCAO43653 123 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 TMEM50AO95807 157 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 TTC32Q5I0X7 151 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 SP5Q6BEB4 398 aaPredicted RBP7.11□□□□□ -1.27
ABCA4-201ENST00000370225 FAM90A1Q86YD7 464 aa7.11□□□□□ -1.27
ABCA4-201ENST00000370225 LOC102723996A0A087X1L8 192 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 EFNB1P98172 346 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 LCNL1Q6ZST4 164 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 KLHL30-AS1Q8NEE0 82 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 FLVCR1-AS1Q8TAF5 88 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 TNFRSF14Q92956 283 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 CHCHD5Q9BSY4 110 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 SSBP4Q9BWG4 385 aaPredicted RBP7.1□□□□□ -1.27
ABCA4-201ENST00000370225 IGLV3-12A0A075B6K2 115 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 SEPSECSQ9HD40 501 aaKnown RBP7.1□□□□□ -1.27
ABCA4-201ENST00000370225 A0A0G2JMZ2 1700 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 LRRC37A2A6NM11 1700 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 COL4A6Q14031 1691 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 SHISA3A0PJX4 238 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 OR9G9P0C7N8 305 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 HOXA5P20719 270 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 LBHQ53QV2 105 aaPredicted RBP7.1□□□□□ -1.27
ABCA4-201ENST00000370225 CACNA1GO43497 2377 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 TP53BP1Q12888 1972 aaPredicted RBP7.1□□□□□ -1.27
ABCA4-201ENST00000370225 PMCHL1Q16048 86 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 ACTL10Q5JWF8 245 aa7.1□□□□□ -1.27
ABCA4-201ENST00000370225 A0A1B0GW15 77 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 OR11H12B2RN74 326 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 SMIM6P0DI80 62 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 NUDT10Q8NFP7 164 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 OR11H1Q8NG94 326 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 OR11H2Q8NH07 326 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 UBE2E2Q96LR5 201 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 SDK2Q58EX2 2172 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 A0A1B0GUT8 65 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 CXorf65A6NEN9 183 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 C15orf61A6NNL5 157 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 YPEL1O60688 119 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 ZNF324BQ6AW86 544 aaPredicted RBP7.09□□□□□ -1.27
ABCA4-201ENST00000370225 SFTA2Q6UW10 78 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 FAM19A2Q8N3H0 131 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 FBLIM1Q8WUP2 373 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 YPEL2Q96QA6 119 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 AHCTF1Q8WYP5 2266 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 A0A1B0GTI1 187 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 TMEM250H0YL14 139 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 APOMO95445 188 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 DSCR9P59020 149 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 NPC2P61916 151 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 C15orf32Q32M92 178 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 IGKV2-40A0A087WW87 121 aaPredicted RBP7.09□□□□□ -1.27
ABCA4-201ENST00000370225 HIGD1CA8MV81 97 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 IGKV2D-40P01614 121 aaPredicted RBP7.09□□□□□ -1.27
ABCA4-201ENST00000370225 C10orf55Q5SWW7 151 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 ST20Q9HBF5 79 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 YLPM1P49750 1951 aaKnown RBP7.09□□□□□ -1.27
ABCA4-201ENST00000370225 TBX6O95947 436 aaPredicted RBP7.09□□□□□ -1.27
ABCA4-201ENST00000370225 FAM89BQ8N5H3 189 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 LTBP1Q14766 1721 aa7.09□□□□□ -1.27
ABCA4-201ENST00000370225 SAMD13Q5VXD3 122 aa7.09□□□□□ -1.28
ABCA4-201ENST00000370225 LINC00114Q6XXX2 140 aa7.09□□□□□ -1.28
ABCA4-201ENST00000370225 ZNF319Q9P2F9 582 aa7.09□□□□□ -1.28
ABCA4-201ENST00000370225 FAM186AA6NE01 2351 aa7.09□□□□□ -1.28
ABCA4-201ENST00000370225 ZDBF2Q9HCK1 2354 aa7.09□□□□□ -1.28
ABCA4-201ENST00000370225 RUSC1-AS1Q66K80 236 aa7.08□□□□□ -1.28
ABCA4-201ENST00000370225 GGNQ86UU5 652 aa7.08□□□□□ -1.28
ABCA4-201ENST00000370225 C14orf144Q96I85 54 aa7.08□□□□□ -1.28
ABCA4-201ENST00000370225 TRAV5A0A0B4J249 113 aa7.08□□□□□ -1.28
ABCA4-201ENST00000370225 ERASQ7Z444 233 aa7.08□□□□□ -1.28
ABCA4-201ENST00000370225 C1QTNF9BB2RNN3 333 aa7.08□□□□□ -1.28
ABCA4-201ENST00000370225 C1QTNF9P0C862 333 aa7.08□□□□□ -1.28
ABCA4-201ENST00000370225 COL8A2P25067 703 aa7.08□□□□□ -1.28
ABCA4-201ENST00000370225 TIMP3P35625 211 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms