RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 LINC01548A6NM66 108 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 PRSS46E5RG02 174 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 APOC3P02656 99 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 BLCAPP62952 87 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 RAB31Q13636 194 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 UNQ5815/PRO19632Q6UWF5 114 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 SLC35E3Q7Z769 313 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 TMEM86BQ8N661 226 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 SGMS2Q8NHU3 365 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 SMDT1Q9H4I9 107 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 TMA7Q9Y2S6 64 aaKnown RBP12.54□□□□□ -0.4
LMNA-203ENST00000368297 F8W036 122 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 EGR2P11161 476 aaPredicted RBP12.54□□□□□ -0.4
LMNA-203ENST00000368297 DEFA4P12838 97 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 ELLP55199 621 aaPredicted RBP12.54□□□□□ -0.4
LMNA-203ENST00000368297 SRSF3P84103 164 aaKnown RBP12.54□□□□□ -0.4
LMNA-203ENST00000368297 C19orf35Q6ZS72 473 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 ZNF114Q8NC26 417 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 MBD3L1Q8WWY6 194 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 TMEM231Q9H6L2 316 aa12.54□□□□□ -0.4
LMNA-203ENST00000368297 F11RQ9Y624 299 aaKnown RBP12.54□□□□□ -0.4
LMNA-203ENST00000368297 NAV3Q8IVL0 2385 aa12.53□□□□□ -0.4
LMNA-203ENST00000368297 SVEP1Q4LDE5 3571 aa12.53□□□□□ -0.4
LMNA-203ENST00000368297 DNAJC9-AS1A6NH13 148 aa12.53□□□□□ -0.4
LMNA-203ENST00000368297 INAFM1C9JVW0 142 aa12.53□□□□□ -0.4
LMNA-203ENST00000368297 ACOT6Q3I5F7 207 aaPredicted RBP12.53□□□□□ -0.4
LMNA-203ENST00000368297 FFAR4Q5NUL3 377 aa12.53□□□□□ -0.4
LMNA-203ENST00000368297 ASPHD1Q5U4P2 390 aa12.53□□□□□ -0.4
LMNA-203ENST00000368297 OR5T1Q8NG75 326 aa12.53□□□□□ -0.4
LMNA-203ENST00000368297 MISP3Q96FF7 219 aa12.53□□□□□ -0.4
LMNA-203ENST00000368297 WNT10AQ9GZT5 417 aa12.53□□□□□ -0.4
LMNA-203ENST00000368297 A0A1B0GV50 99 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 NPIPB5A8MRT5 1133 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 IGHG2P01859 326 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 CTRB1P17538 263 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 DEFA5Q01523 94 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 ARSJQ5FYB0 599 aaPredicted RBP12.52□□□□□ -0.4
LMNA-203ENST00000368297 CTRB2Q6GPI1 263 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 SPSB3Q6PJ21 355 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 TEPPQ6URK8 271 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 TREML4Q6UXN2 200 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 OR1P1Q8NH06 330 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 ZNF418Q8TF45 676 aaPredicted RBP12.52□□□□□ -0.4
LMNA-203ENST00000368297 SEC11CQ9BY50 192 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 ACTR3CQ9C0K3 210 aaPredicted RBP12.52□□□□□ -0.4
LMNA-203ENST00000368297 SLC39A9Q9NUM3 307 aa12.52□□□□□ -0.4
LMNA-203ENST00000368297 SONP18583 2426 aaKnown RBP12.51□□□□□ -0.41
LMNA-203ENST00000368297 CYB5BO43169 146 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 OPRK1P41145 380 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 TTC9CQ8N5M4 171 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 OR10G4Q8NGN3 311 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 OR10G9Q8NGN4 311 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 OR10G7Q8NGN6 311 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 RNASEH2CQ8TDP1 164 aaKnown RBP12.51□□□□□ -0.41
LMNA-203ENST00000368297 CACNG8Q8WXS5 425 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 RCC1LQ96I51 464 aaKnown RBP12.51□□□□□ -0.41
LMNA-203ENST00000368297 PRSS22Q9GZN4 317 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 NPFFR1Q9GZQ6 430 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 VSIRQ9H7M9 311 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 LINC00527Q9UJ94 153 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 TRAV41A0A0B4J266 112 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 RBFOX3A6NFN3 312 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 G3V318 75 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 CRYGCP07315 174 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 GPX4P36969 197 aaPredicted RBP12.51□□□□□ -0.41
LMNA-203ENST00000368297 MFAP2P55001 183 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 C10orf91Q5T1B1 145 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 ACSM6Q6P461 480 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 Q6ZS46 218 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 SVBPQ8N300 66 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 OR1L6Q8NGR2 347 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 FAM110DQ8TAY7 271 aaPredicted RBP12.51□□□□□ -0.41
LMNA-203ENST00000368297 TMEM68Q96MH6 324 aa12.51□□□□□ -0.41
LMNA-203ENST00000368297 CARHSP1Q9Y2V2 147 aaKnown RBP12.51□□□□□ -0.41
LMNA-203ENST00000368297 CTXND1A0A1B0GTU2 59 aa12.5□□□□□ -0.41
LMNA-203ENST00000368297 CORTO00230 105 aa12.5□□□□□ -0.41
LMNA-203ENST00000368297 SFTA3P0C7M3 94 aa12.5□□□□□ -0.41
LMNA-203ENST00000368297 AKIRIN2Q53H80 203 aa12.5□□□□□ -0.41
LMNA-203ENST00000368297 ZNF355PQ9NSJ1 428 aa12.5□□□□□ -0.41
LMNA-203ENST00000368297 SETXQ7Z333 2677 aaKnown RBP12.49□□□□□ -0.41
LMNA-203ENST00000368297 MAP1LC3B2A6NCE7 125 aa12.49□□□□□ -0.41
LMNA-203ENST00000368297 AP4M1O00189 453 aa12.49□□□□□ -0.41
LMNA-203ENST00000368297 IFNA1P01562 189 aa12.49□□□□□ -0.41
LMNA-203ENST00000368297 CCL20P78556 96 aa12.49□□□□□ -0.41
LMNA-203ENST00000368297 CD69Q07108 199 aa12.49□□□□□ -0.41
LMNA-203ENST00000368297 LCN15Q6UWW0 184 aa12.49□□□□□ -0.41
LMNA-203ENST00000368297 SLC16A13Q7RTY0 426 aa12.49□□□□□ -0.41
LMNA-203ENST00000368297 TMEM144Q7Z5S9 345 aa12.49□□□□□ -0.41
LMNA-203ENST00000368297 SLC35E1Q96K37 410 aa12.49□□□□□ -0.41
LMNA-203ENST00000368297 MAP1LC3BQ9GZQ8 125 aa12.49□□□□□ -0.41
LMNA-203ENST00000368297 LSM4Q9Y4Z0 139 aaKnown RBP12.49□□□□□ -0.41
LMNA-203ENST00000368297 HIVEP2P31629 2446 aa12.49□□□□□ -0.41
LMNA-203ENST00000368297 TSPAN9O75954 239 aa12.48□□□□□ -0.41
LMNA-203ENST00000368297 IGF1P05019 195 aa12.48□□□□□ -0.41
LMNA-203ENST00000368297 PPT1P50897 306 aa12.48□□□□□ -0.41
LMNA-203ENST00000368297 CRIP2P52943 208 aaPredicted RBP12.48□□□□□ -0.41
LMNA-203ENST00000368297 MLANAQ16655 118 aa12.48□□□□□ -0.41
LMNA-203ENST00000368297 PVRIGQ6DKI7 326 aa12.48□□□□□ -0.41
LMNA-203ENST00000368297 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
LMNA-203ENST00000368297 NOL4LQ96MY1 436 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms