RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SSBP3Q9BWW4 388 aaPredicted RBP9.85□□□□□ -0.83
CDC42BPA-202ENST00000366764 SRRM5B3KS81 715 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 ANOS1P23352 680 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 SEC11AP67812 179 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 RELQ04864 619 aaPredicted RBP9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 GGTLC1Q9BX51 225 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 EGR1P18146 543 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 GFI1BQ5VTD9 330 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 MBNL2Q5VZF2 373 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 VCX2Q9H322 139 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 C1QTNF9P0C862 333 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 SYT8Q8NBV8 401 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 ITGB1BP1O14713 200 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 NUTF2P61970 127 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 DMRTA1Q5VZB9 504 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 NEU1Q99519 415 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 TMSB15BA0A087X1C1 80 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 ADMP35318 185 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 C2orf83Q53S99 150 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 OCC1Q8TAD7 63 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 SIGLEC12Q96PQ1 595 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 MRPL27Q9P0M9 148 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 KLF2Q9Y5W3 355 aaPredicted RBP9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 NTN3O00634 580 aaPredicted RBP9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 FTH1P19P0C7X4 201 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 DGAT2L7PQ6IED9 249 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 OR4X2Q8NGF9 303 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 PHLDA3Q9Y5J5 127 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 DLX6P56179 175 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 CD69Q07108 199 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 ECSCRQ19T08 205 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 HIST1H4GQ99525 98 aa9.84□□□□□ -0.83
CDC42BPA-202ENST00000366764 IGHV2-5P01817 119 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 TYMSP04818 313 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 IL4P05112 153 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 MIR17HGQ75NE6 70 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 TNFRSF14Q92956 283 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 M0R3E3 92 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 NUDT3O95989 172 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 CELA3AP09093 270 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 IGHV1-2P23083 117 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 FCGR2BP31994 310 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 PVRIGQ6DKI7 326 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 FAM90A2PQ658T7 463 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 OR1N2Q8NGR9 330 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 WNT10AQ9GZT5 417 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 MS4A6AQ9H2W1 248 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 LPAR2Q9HBW0 351 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 CSRP1P21291 193 aaKnown RBP9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 OR11H12B2RN74 326 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 OR11H1Q8NG94 326 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 OR11H2Q8NH07 326 aa9.83□□□□□ -0.84
CDC42BPA-202ENST00000366764 EXPH5Q8NEV8 1989 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 CD55P08174 381 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 COX6CP09669 75 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 APELAP0DMC3 54 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 CD40P25942 277 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 PRELID3AQ96N28 172 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 ALKBH7Q9BT30 221 aaPredicted RBP9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 RNF224P0DH78 156 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 ATOH7Q8N100 152 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 NOTCH2Q04721 2471 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 PPIAL4CA0A0B4J2A2 164 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 PPIAL4GP0DN37 164 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 LEAP2Q969E1 77 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 SAA1P0DJI8 122 aaPredicted RBP9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 C16orf92Q96LL3 132 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 GZMBP10144 247 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 KHDC1LQ5JSQ8 128 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 Q9H3A6 140 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 EPDR1Q9UM22 224 aa9.82□□□□□ -0.84
CDC42BPA-202ENST00000366764 IGHV2-70P01814 119 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 C21orf62-AS1Q17RA5 79 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 SFTPCP11686 197 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 STPG1Q5TH74 334 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 MESP1Q9BRJ9 268 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 CELA3BP08861 270 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 C14orf144Q96I85 54 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 SPSB3Q6PJ21 355 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 C20orf144Q9BQM9 153 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 CX3CL1P78423 397 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 KIR2DL4Q99706 377 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 RNASE7Q9H1E1 156 aaKnown RBP9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 HIVEP2P31629 2446 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 IGHV1-69-2A0A0G2JMI3 117 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 OR5A1Q8NGJ0 315 aa9.81□□□□□ -0.84
CDC42BPA-202ENST00000366764 MOSP00540 346 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 Q6P435 159 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 MRPL20Q9BYC9 149 aaKnown RBP9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 NXT2Q9NPJ8 142 aaKnown RBP9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 MBNL3Q9NUK0 354 aaKnown RBP9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 IL15RAQ13261 267 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 COLCA1Q6ZS62 124 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 FAM169BQ8N8A8 192 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 VOPP1Q96AW1 172 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 TLN2Q9Y4G6 2542 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 IGHV3-21A0A0B4J1V1 117 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 LINC01549A6NIU2 74 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 HIST1H1AQ02539 215 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms