RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 FTH1P19P0C7X4 201 aa11.52□□□□□ -0.56
COL6A1-201ENST00000361866 SRSF7Q16629 238 aaKnown RBP eCLIP11.52□□□□□ -0.56
COL6A1-201ENST00000361866 CRYABP02511 175 aaKnown RBP11.52□□□□□ -0.56
COL6A1-201ENST00000361866 HBBP68871 147 aa11.52□□□□□ -0.56
COL6A1-201ENST00000361866 WFDC3Q8IUB2 231 aa11.52□□□□□ -0.56
COL6A1-201ENST00000361866 MUC6Q6W4X9 2439 aa11.52□□□□□ -0.57
COL6A1-201ENST00000361866 TM4SF20Q53R12 229 aa11.52□□□□□ -0.57
COL6A1-201ENST00000361866 Q6ZS49 121 aa11.52□□□□□ -0.57
COL6A1-201ENST00000361866 C9orf106Q8NAJ2 232 aa11.52□□□□□ -0.57
COL6A1-201ENST00000361866 OR4C13Q8NGP0 309 aa11.52□□□□□ -0.57
COL6A1-201ENST00000361866 SSC4DQ8WTU2 575 aa11.52□□□□□ -0.57
COL6A1-201ENST00000361866 GUCD1Q96NT3 240 aa11.52□□□□□ -0.57
COL6A1-201ENST00000361866 ZNF207O43670 478 aaKnown RBP11.52□□□□□ -0.57
COL6A1-201ENST00000361866 FAM27E3Q08E93 113 aa11.52□□□□□ -0.57
COL6A1-201ENST00000361866 KIR3DL3Q8N743 410 aa11.52□□□□□ -0.57
COL6A1-201ENST00000361866 MCRIP2Q9BUT9 160 aaKnown RBP11.52□□□□□ -0.57
COL6A1-201ENST00000361866 MRPL20Q9BYC9 149 aaKnown RBP11.52□□□□□ -0.57
COL6A1-201ENST00000361866 FAM90A27PA6NNH2 459 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 C15orf61A6NNL5 157 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 HLA-DRB1P01911 266 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 SAA1P0DJI8 122 aaPredicted RBP11.51□□□□□ -0.57
COL6A1-201ENST00000361866 FCGR2BP31994 310 aaPredicted RBP11.51□□□□□ -0.57
COL6A1-201ENST00000361866 CA7P43166 264 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 AP5S1Q9NUS5 200 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 KBTBD11-OT1A0A1B0GTJ5 212 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 TDGF1P3P51864 188 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 SPRR3Q9UBC9 169 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 IGHV3OR16-8A0A075B7F1 116 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 CGB1A6NKQ9 187 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 J3QW42 95 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 COLCA1Q6ZS62 124 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 ZGRF1Q86YA3 2104 aa11.51□□□□□ -0.57
COL6A1-201ENST00000361866 C3orf79P0CE67 100 aa11.5□□□□□ -0.57
COL6A1-201ENST00000361866 ZNF841Q6ZN19 808 aa11.5□□□□□ -0.57
COL6A1-201ENST00000361866 SNRNP40Q96DI7 357 aaKnown RBP11.5□□□□□ -0.57
COL6A1-201ENST00000361866 TMUB1Q9BVT8 246 aa11.5□□□□□ -0.57
COL6A1-201ENST00000361866 A6NDN8 102 aa11.5□□□□□ -0.57
COL6A1-201ENST00000361866 C16orf97H3BN30 126 aa11.5□□□□□ -0.57
COL6A1-201ENST00000361866 M0QZ24 198 aa11.5□□□□□ -0.57
COL6A1-201ENST00000361866 GFRA3O60609 400 aa11.5□□□□□ -0.57
COL6A1-201ENST00000361866 NPSP0C0P6 89 aa11.5□□□□□ -0.57
COL6A1-201ENST00000361866 GCSHP23434 173 aa11.5□□□□□ -0.57
COL6A1-201ENST00000361866 LDLRAD2Q5SZI1 272 aa11.5□□□□□ -0.57
COL6A1-201ENST00000361866 C18orf15Q96N68 181 aa11.5□□□□□ -0.57
COL6A1-201ENST00000361866 IZUMO1RA6ND01 250 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 CKS2P33552 79 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 TWIST1Q15672 202 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 TMEM116Q8NCL8 245 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 WDR31Q8NA23 367 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 OSTCQ9NRP0 149 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 MRPS18CQ9Y3D5 142 aaKnown RBP11.49□□□□□ -0.57
COL6A1-201ENST00000361866 MLNRO43193 412 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 YPEL1O60688 119 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 PLP1P60201 277 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 CD177Q8N6Q3 437 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 OR52E5Q8NH55 327 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 YPEL2Q96QA6 119 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 DIRC2Q96SL1 478 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 C19orf24Q9BVV8 132 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 GNB1LQ9BYB4 327 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 LPAR2Q9HBW0 351 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 CDC42EP3Q9UKI2 254 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 PIEZO2Q9H5I5 2752 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 PLXNB1O43157 2135 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 CD40P25942 277 aa11.49□□□□□ -0.57
COL6A1-201ENST00000361866 RANBP2P49792 3224 aaKnown RBP11.48□□□□□ -0.57
COL6A1-201ENST00000361866 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
COL6A1-201ENST00000361866 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
COL6A1-201ENST00000361866 NTN3O00634 580 aaPredicted RBP11.48□□□□□ -0.57
COL6A1-201ENST00000361866 GRAMD2BQ96HH9 432 aa11.48□□□□□ -0.57
COL6A1-201ENST00000361866 SCNM1Q9BWG6 230 aa11.48□□□□□ -0.57
COL6A1-201ENST00000361866 MRPL32Q9BYC8 188 aaKnown RBP11.48□□□□□ -0.57
COL6A1-201ENST00000361866 ZNRD1Q9P1U0 126 aa11.48□□□□□ -0.57
COL6A1-201ENST00000361866 MED12LQ86YW9 2145 aa11.48□□□□□ -0.57
COL6A1-201ENST00000361866 TRBV6-6A0A0A6YYG2 114 aa11.48□□□□□ -0.57
COL6A1-201ENST00000361866 AHRRA9YTQ3 701 aa11.48□□□□□ -0.57
COL6A1-201ENST00000361866 GPX1P07203 203 aa11.48□□□□□ -0.57
COL6A1-201ENST00000361866 GLRXP35754 106 aa11.48□□□□□ -0.57
COL6A1-201ENST00000361866 ARF6P62330 175 aa11.48□□□□□ -0.57
COL6A1-201ENST00000361866 TMEM189A5PLL7 270 aa11.47□□□□□ -0.57
COL6A1-201ENST00000361866 APOHP02749 345 aaPredicted RBP11.47□□□□□ -0.57
COL6A1-201ENST00000361866 Q6ZWC4 215 aa11.47□□□□□ -0.57
COL6A1-201ENST00000361866 C1orf174Q8IYL3 243 aa11.47□□□□□ -0.57
COL6A1-201ENST00000361866 RNASEH2CQ8TDP1 164 aaKnown RBP11.47□□□□□ -0.57
COL6A1-201ENST00000361866 FGF23Q9GZV9 251 aaPredicted RBP11.47□□□□□ -0.57
COL6A1-201ENST00000361866 UPK2O00526 184 aa11.47□□□□□ -0.57
COL6A1-201ENST00000361866 TMEM97Q5BJF2 176 aa11.47□□□□□ -0.57
COL6A1-201ENST00000361866 TMEM136Q6ZRR5 245 aa11.47□□□□□ -0.57
COL6A1-201ENST00000361866 NAA38Q9BRA0 125 aaKnown RBP11.47□□□□□ -0.57
COL6A1-201ENST00000361866 ZFP30Q9Y2G7 519 aa11.47□□□□□ -0.57
COL6A1-201ENST00000361866 TRAV9-1A0A075B6T8 112 aa11.47□□□□□ -0.57
COL6A1-201ENST00000361866 MBNL2Q5VZF2 373 aaKnown RBP11.47□□□□□ -0.57
COL6A1-201ENST00000361866 WDR86Q86TI4 376 aa11.47□□□□□ -0.57
COL6A1-201ENST00000361866 MBNL3Q9NUK0 354 aaKnown RBP11.47□□□□□ -0.57
COL6A1-201ENST00000361866 THYN1Q9P016 225 aa11.47□□□□□ -0.57
COL6A1-201ENST00000361866 FBXL7Q9UJT9 491 aa11.47□□□□□ -0.57
COL6A1-201ENST00000361866 OBSL1O75147 1896 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 TRAV9-2A0A087WT02 112 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 CIDEAO60543 219 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 LIPFP07098 398 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms