RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 PSG3Q16557 428 aa11.21□□□□□ -0.62
CCDC144A-203ENST00000360495 C2orf82Q6UX34 121 aa11.21□□□□□ -0.62
CCDC144A-203ENST00000360495 IGKV1D-8A0A087WSZ0 117 aa11.21□□□□□ -0.62
CCDC144A-203ENST00000360495 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.21□□□□□ -0.62
CCDC144A-203ENST00000360495 SYS1-DBNDD2H3BUS1 97 aa11.21□□□□□ -0.62
CCDC144A-203ENST00000360495 UPK2O00526 184 aa11.21□□□□□ -0.62
CCDC144A-203ENST00000360495 LINC01559Q495D7 138 aa11.21□□□□□ -0.62
CCDC144A-203ENST00000360495 RASL11AQ6T310 242 aa11.21□□□□□ -0.62
CCDC144A-203ENST00000360495 PRR7Q8TB68 274 aa11.21□□□□□ -0.62
CCDC144A-203ENST00000360495 POLR3KQ9Y2Y1 108 aaPredicted RBP11.21□□□□□ -0.62
CCDC144A-203ENST00000360495 A0A0A6YYD4 124 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 PRR32B1ATL7 298 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 KLF17Q5JT82 389 aaPredicted RBP11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 CFAP161Q6P656 301 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 FAM89BQ8N5H3 189 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 DUX3Q96PT4 197 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 LSM4Q9Y4Z0 139 aaKnown RBP11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 ABCA3Q99758 1704 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 TCRBV4S1A1TA0A5B7 111 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 TMEM238C9JI98 176 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 CCL21O00585 134 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 TM4SF5O14894 197 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 TMPRSS3P57727 454 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 SEPSECSQ9HD40 501 aaKnown RBP11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 NPSP0C0P6 89 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 TDGF1P13385 188 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 PAPPAQ13219 1627 aa11.2□□□□□ -0.62
CCDC144A-203ENST00000360495 A0A0U1RRA0 63 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 MST1P26927 711 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 AGMATQ9BSE5 352 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 C1QTNF5Q9BXJ0 243 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 IGKV1-9A0A0C4DH69 117 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 D6R8Y8 96 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 SLC25A48Q6ZT89 311 aaKnown RBP11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 FGF11Q92914 225 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 DUSP15Q9H1R2 295 aaPredicted RBP11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 CD28P10747 220 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 LAGE3Q14657 143 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 ZNF48Q96MX3 618 aaPredicted RBP11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 NCOR1P1Q9H4R4 102 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 MRPL27Q9P0M9 148 aaKnown RBP11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 OTOFQ9HC10 1997 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 PATE3B3GLJ2 98 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 LGALS1P09382 135 aaKnown RBP11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 SUPT4H1P63272 117 aaKnown RBP11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 REPIN1Q9BWE0 567 aaKnown RBP11.19□□□□□ -0.62
CCDC144A-203ENST00000360495 NCR2O95944 276 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 IGHV2-70P01814 119 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 FAM216BQ8N7L0 139 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 RFNGQ9Y644 331 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 COX6A1P12074 109 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 CACNA1DQ01668 2161 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 SAA2-SAA4A0A096LPE2 208 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 SAA2P0DJI9 122 aaPredicted RBP11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 RPRMLQ8N4K4 120 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 RPP25LQ8N5L8 163 aaKnown RBP11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 BMPERQ8N8U9 685 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 OR9G9P0C7N8 305 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 FAM201AQ5SY85 155 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 CLEC2AQ6UVW9 174 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 DPH3Q96FX2 82 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 STRCQ7RTU9 1775 aa11.18□□□□□ -0.62
CCDC144A-203ENST00000360495 PTPRFP10586 1907 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 IGKV1D-33P01593 117 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 IGKV1-33P01594 117 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 CD7P09564 240 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 LINC00271P0C7V0 271 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 FXYD7P58549 80 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 CDCP2Q5VXM1 449 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 ARPC1AQ92747 370 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 RNF125Q96EQ8 232 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 HGFACQ04756 655 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 C9orf153Q5TBE3 101 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 CLEC19AQ6UXS0 136 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 ZNF638Q14966 1978 aaKnown RBP11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 SCN4AP35499 1836 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 F2Z2F3 143 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 SPATA31B1PQ5VZV4 182 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 FAM90A2PQ658T7 463 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 RTN4RL2Q86UN3 420 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 LHFPL1Q86WI0 220 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 SLC50A1Q9BRV3 221 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 GGTLC1Q9BX51 225 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 GAS1P54826 345 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 NPC2P61916 151 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 PCOLCEQ15113 449 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 SPANXA1Q9NS26 97 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 NEUROG3Q9Y4Z2 214 aa11.17□□□□□ -0.62
CCDC144A-203ENST00000360495 NPIPB5A8MRT5 1133 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 GFRA3O60609 400 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 PHLDA1Q8WV24 401 aaPredicted RBP11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 DPM3Q9P2X0 92 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 SCN8AQ9UQD0 1980 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 FAM231BA6NCW3 169 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 LHX2P50458 406 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 ITGB1BP1O14713 200 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms