RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SGMS2Q8NHU3 365 aa10.93□□□□□ -0.66
PDLIM5-203ENST00000359265 C22orf15Q8WYQ4 148 aa10.93□□□□□ -0.66
PDLIM5-203ENST00000359265 CXorf58Q96LI9 332 aa10.93□□□□□ -0.66
PDLIM5-203ENST00000359265 WNT10AQ9GZT5 417 aa10.93□□□□□ -0.66
PDLIM5-203ENST00000359265 ATP6V0E1O15342 81 aa10.92□□□□□ -0.66
PDLIM5-203ENST00000359265 CRYGCP07315 174 aa10.92□□□□□ -0.66
PDLIM5-203ENST00000359265 MFAP2P55001 183 aa10.92□□□□□ -0.66
PDLIM5-203ENST00000359265 TTC9CQ8N5M4 171 aa10.92□□□□□ -0.66
PDLIM5-203ENST00000359265 TMEM68Q96MH6 324 aa10.92□□□□□ -0.66
PDLIM5-203ENST00000359265 GGTLC1Q9BX51 225 aa10.92□□□□□ -0.66
PDLIM5-203ENST00000359265 MED9Q9NWA0 146 aa10.92□□□□□ -0.66
PDLIM5-203ENST00000359265 CDC42EP3Q9UKI2 254 aa10.92□□□□□ -0.66
PDLIM5-203ENST00000359265 LSM4Q9Y4Z0 139 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-203ENST00000359265 RFNGQ9Y644 331 aa10.92□□□□□ -0.66
PDLIM5-203ENST00000359265 IGHV4-59P01825 116 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 MBP02144 154 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 IER3P46695 156 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 ELLP55199 621 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 GAMTQ14353 236 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 TMEM41BQ5BJD5 291 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 FFAR4Q5NUL3 377 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 PXDC1Q5TGL8 231 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 ASPHD1Q5U4P2 390 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 UNQ5815/PRO19632Q6UWF5 114 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 Q6YL49 198 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 IL17RELQ6ZVW7 336 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 COMMD7Q86VX2 200 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 SLC7A5P1Q8MH63 180 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 LFNGQ8NES3 379 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 FAM213BQ8TBF2 198 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 ACY3Q96HD9 319 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 MGST2Q99735 147 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 PRDM13Q9H4Q3 707 aa10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 FNDC4Q9H6D8 234 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-203ENST00000359265 ATP6V1G1O75348 118 aa10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 AMY1AP04745 511 aa10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 EGR2P11161 476 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 CRIP2P52943 208 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 SRSF2Q01130 221 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 ZNF616Q08AN1 781 aa10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 ECSCRQ19T08 205 aa10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 C9orf152Q5JTZ5 239 aa10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 RBMS3Q6XE24 437 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 C19orf35Q6ZS72 473 aa10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 FAM110DQ8TAY7 271 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 C19orf24Q9BVV8 132 aa10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 PKD1L1Q8TDX9 2849 aa10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 SVEP1Q4LDE5 3571 aa10.9□□□□□ -0.66
PDLIM5-203ENST00000359265 SH2D7A6NKC9 451 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 NUDT19A8MXV4 375 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 AGPAT2O15120 278 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 MT-CO2P00403 227 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 HIST1H1BP16401 226 aaKnown RBP10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 SRD5A1P18405 259 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 RND2P52198 227 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 MLANAQ16655 118 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 ACOT6Q3I5F7 207 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 ACSM6Q6P461 480 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 SLC35E3Q7Z769 313 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 ZNF48Q96MX3 618 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 THYN1Q9P016 225 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 VPREB3Q9UKI3 123 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 DMRT1Q9Y5R6 373 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 PXMP4Q9Y6I8 212 aa10.89□□□□□ -0.67
PDLIM5-203ENST00000359265 IGLV11-55A0A075B6I3 123 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 I3L2K1 104 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 TSPAN15O95858 294 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 IGHG2P01859 326 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 HBE1P02100 147 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 OR10J1P30954 320 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 RPL29P47914 159 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 FHITP49789 147 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 AKIRIN2Q53H80 203 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 MIC13Q5XKP0 118 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 THAP8Q8NA92 274 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 OR2T6Q8NHC8 308 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 NPIPB3Q92617 1050 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 HRH4Q9H3N8 390 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 RPRMQ9NS64 109 aa10.88□□□□□ -0.67
PDLIM5-203ENST00000359265 TRAV41A0A0B4J266 112 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 ZFP92A6NM28 416 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 TEX46H3BTG2 121 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 H2AFB1P0C5Y9 115 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 M6PRP20645 277 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 RAB2AP61019 212 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 B2MP61769 119 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 IL34Q6ZMJ4 242 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 CYP2G1PQ6ZSU1 146 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 TMEM86BQ8N661 226 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 STPG3Q8N7X2 389 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 SIGLECL1Q8N7X8 197 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 TMEM116Q8NCL8 245 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 OR5T1Q8NG75 326 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 FANCD2OSQ96PS1 177 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 VSIRQ9H7M9 311 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 SLC39A9Q9NUM3 307 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 SLC45A2Q9UMX9 530 aa10.87□□□□□ -0.67
PDLIM5-203ENST00000359265 IGHV3-21A0A0B4J1V1 117 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 TCRBV4S1A1TA0A5B7 111 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 LINC01548A6NM66 108 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms