RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 GLRXP35754 106 aa14.54□□□□□ -0.08
COL27A1-201ENST00000356083 IMMP1LQ96LU5 166 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 A0A1W2PQF6 199 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 ZNF474Q6S9Z5 364 aaPredicted RBP14.53□□□□□ -0.08
COL27A1-201ENST00000356083 NIT1Q86X76 327 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 SHANK3Q9BYB0 1731 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 DEFB130BP0DP73 79 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 DEFB130AP0DP74 79 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 TFF3Q07654 80 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 MESP2Q0VG99 397 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 Q6ZT83 130 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 G6PC2Q9NQR9 355 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 A0A1W2PPC1 479 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 CCL3L1P16619 93 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 ANAPC13Q9BS18 74 aa14.53□□□□□ -0.08
COL27A1-201ENST00000356083 C1QCP02747 245 aa14.52□□□□□ -0.08
COL27A1-201ENST00000356083 CLDN16Q9Y5I7 305 aa14.52□□□□□ -0.08
COL27A1-201ENST00000356083 CELA3AP09093 270 aa14.52□□□□□ -0.08
COL27A1-201ENST00000356083 DLX4Q92988 240 aaPredicted RBP14.52□□□□□ -0.08
COL27A1-201ENST00000356083 COX6A1P12074 109 aa14.52□□□□□ -0.08
COL27A1-201ENST00000356083 ACP7Q6ZNF0 438 aa14.52□□□□□ -0.08
COL27A1-201ENST00000356083 RNASE7Q9H1E1 156 aaKnown RBP14.52□□□□□ -0.08
COL27A1-201ENST00000356083 PRB1P04280 392 aa14.52□□□□□ -0.09
COL27A1-201ENST00000356083 CECR9P0C854 216 aa14.52□□□□□ -0.09
COL27A1-201ENST00000356083 FMC1Q96HJ9 113 aa14.52□□□□□ -0.09
COL27A1-201ENST00000356083 CELA3BP08861 270 aa14.52□□□□□ -0.09
COL27A1-201ENST00000356083 RND3P61587 244 aa14.52□□□□□ -0.09
COL27A1-201ENST00000356083 C19orf24Q9BVV8 132 aa14.52□□□□□ -0.09
COL27A1-201ENST00000356083 SSBP4Q9BWG4 385 aaPredicted RBP14.51□□□□□ -0.09
COL27A1-201ENST00000356083 HIST1H2BAQ96A08 127 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 GSN-AS1Q9NRJ2 163 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 LHFPL6Q9Y693 200 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 VWC2LB2RUY7 222 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 CXCL2P19875 107 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 GATA4P43694 442 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 PCP4P48539 62 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 CHTOPQ9Y3Y2 248 aaKnown RBP14.51□□□□□ -0.09
COL27A1-201ENST00000356083 PARP14Q460N5 1801 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 ZP1P60852 638 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 VAX1Q5SQQ9 334 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 MIXL1Q9H2W2 232 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 LSM4Q9Y4Z0 139 aaKnown RBP14.51□□□□□ -0.09
COL27A1-201ENST00000356083 FABP5P3A8MUU1 101 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 FUT5Q11128 374 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 PUSL1Q8N0Z8 303 aaKnown RBP14.51□□□□□ -0.09
COL27A1-201ENST00000356083 GTF3AQ92664 365 aaKnown RBP14.51□□□□□ -0.09
COL27A1-201ENST00000356083 SONP18583 2426 aaKnown RBP14.51□□□□□ -0.09
COL27A1-201ENST00000356083 KBTBD11-OT1A0A1B0GTJ5 212 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 HMGA2P52926 109 aa14.51□□□□□ -0.09
COL27A1-201ENST00000356083 TIAF1O95411 115 aa14.5□□□□□ -0.09
COL27A1-201ENST00000356083 CD300EQ496F6 205 aaPredicted RBP14.5□□□□□ -0.09
COL27A1-201ENST00000356083 RLFQ13129 1914 aa14.5□□□□□ -0.09
COL27A1-201ENST00000356083 PRRC2AP48634 2157 aaKnown RBP14.5□□□□□ -0.09
COL27A1-201ENST00000356083 RPL34P49207 117 aaKnown RBP14.5□□□□□ -0.09
COL27A1-201ENST00000356083 V9GYH0 126 aa14.5□□□□□ -0.09
COL27A1-201ENST00000356083 AHDC1Q5TGY3 1603 aaPredicted RBP14.5□□□□□ -0.09
COL27A1-201ENST00000356083 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
COL27A1-201ENST00000356083 NPIPB13A6NJU9 1138 aa14.5□□□□□ -0.09
COL27A1-201ENST00000356083 NPIPB5A8MRT5 1133 aa14.5□□□□□ -0.09
COL27A1-201ENST00000356083 SPOCK3Q9BQ16 436 aa14.5□□□□□ -0.09
COL27A1-201ENST00000356083 PGPEP1LA6NFU8 196 aa14.5□□□□□ -0.09
COL27A1-201ENST00000356083 ZXDCQ2QGD7 858 aaPredicted RBP14.5□□□□□ -0.09
COL27A1-201ENST00000356083 PAX8Q06710 450 aa14.5□□□□□ -0.09
COL27A1-201ENST00000356083 TRBV9A0A0B4J1U6 114 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 LGALS1P09382 135 aaKnown RBP14.49□□□□□ -0.09
COL27A1-201ENST00000356083 RPP21Q9H633 154 aaKnown RBP14.49□□□□□ -0.09
COL27A1-201ENST00000356083 CTSBP07858 339 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 SIGLEC15Q6ZMC9 328 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 ARHGAP32A7KAX9 2087 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 TRAV25A0A0B4J276 109 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 EPOPA6NHQ4 379 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 RFPL3SP0C7P2 107 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 H3BUT2 72 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 SRSF1Q07955 248 aaKnown RBP eCLIP14.49□□□□□ -0.099e-8■□□□□ 11
COL27A1-201ENST00000356083 FAM110DQ8TAY7 271 aaPredicted RBP14.49□□□□□ -0.09
COL27A1-201ENST00000356083 PKIBQ9C010 78 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 DUSP14O95147 198 aaKnown RBP14.49□□□□□ -0.09
COL27A1-201ENST00000356083 TFF1P04155 84 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 NDPQ00604 133 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 SAP25Q8TEE9 199 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 RALGAPA2Q2PPJ7 1873 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 NRXN3Q9Y4C0 1643 aa14.49□□□□□ -0.09
COL27A1-201ENST00000356083 OCIAD2Q56VL3 154 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 SLC25A47Q6Q0C1 308 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 AMELYQ99218 206 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 RBMY1FQ15415 496 aaKnown RBP14.48□□□□□ -0.09
COL27A1-201ENST00000356083 LOC102723996A0A087X1L8 192 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 DDTP30046 118 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 MAPK1IP1LQ8NDC0 245 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 BRWD3Q6RI45 1802 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 PTPN13Q12923 2485 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 STPG2Q8N412 459 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 TRAV8-1A0A0A6YYK1 113 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 F5H768 121 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 GAGE2EQ4V326 116 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 C8orf82Q6P1X6 216 aaPredicted RBP14.48□□□□□ -0.09
COL27A1-201ENST00000356083 C1orf159Q96HA4 380 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 GAGE2DQ9UEU5 116 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 NBR2O15453 112 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 WNT2P09544 360 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms