RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 BSXQ3C1V8 233 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 RPL7L1Q6DKI1 246 aaKnown RBP5.5□□□□□ -1.53
VPS13A-201ENST00000355766 ALKAL2Q6UX46 152 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 Q6ZSV7 163 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 THNSL2Q86YJ6 484 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 MMD2Q8IY49 270 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 COMMD1Q8N668 190 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 ZNF114Q8NC26 417 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 OR10P1Q8NGE3 313 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 OR5C1Q8NGR4 320 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 OR1L8Q8NGR8 309 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 OR2G3Q8NGZ4 309 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 MALSU1Q96EH3 234 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 TMEM147Q9BVK8 224 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 COMMD5Q9GZQ3 224 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 MAGT1Q9H0U3 335 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 RBKSQ9H477 322 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 C16orf95Q9H693 158 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 PLEKHA3Q9HB20 300 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 ENY2Q9NPA8 101 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 PARP11Q9NR21 331 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 TCF19Q9Y242 345 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 DNAH9Q9NYC9 4486 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 FAM24AA6NFZ4 105 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 IGLV2-23P01705 113 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 IGHV3-7P01780 117 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 OR9G9P0C7N8 305 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 HOXA1P49639 335 aaPredicted RBP5.49□□□□□ -1.53
VPS13A-201ENST00000355766 DYNLT3P51808 116 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 F2RL1P55085 397 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 OR2B8PP59922 312 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 DLK1P80370 383 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 EBI3Q14213 229 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 AANATQ16613 207 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 UTF1Q5T230 341 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 HCP5Q6MZN7 132 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 UQCC3Q6UW78 93 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 IL34Q6ZMJ4 242 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 VMO1Q7Z5L0 202 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 CENPVQ7Z7K6 275 aaPredicted RBP5.49□□□□□ -1.53
VPS13A-201ENST00000355766 PNKDQ8N490 385 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 LFNGQ8NES3 379 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 SLC24A4Q8NFF2 622 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 NPBQ8NG41 125 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 LYPD6BQ8NI32 183 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 CACNG8Q8WXS5 425 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 QTRT1Q9BXR0 403 aaKnown RBP5.49□□□□□ -1.53
VPS13A-201ENST00000355766 OR51B2Q9Y5P1 312 aa5.49□□□□□ -1.53
VPS13A-201ENST00000355766 TRAV1-1A0A0B4J248 108 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 RAB19A4D1S5 217 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 PMS2P5A8MQ11 134 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 TEX46H3BTG2 121 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 CORTO00230 105 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 NDUFS6O75380 124 aaKnown RBP5.48□□□□□ -1.53
VPS13A-201ENST00000355766 NDUFA3O95167 84 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 MOSP00540 346 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 IGHV4-59P01825 116 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 MBP02144 154 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 CRYGBP07316 175 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 GCSHP23434 173 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 COX7A1P24310 79 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 NPY1RP25929 384 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 BRS3P32247 399 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 SUB1P53999 127 aaKnown RBP eCLIP5.48□□□□□ -1.53
VPS13A-201ENST00000355766 RPS16P62249 146 aaKnown RBP5.48□□□□□ -1.53
VPS13A-201ENST00000355766 ARF6P62330 175 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 SLC38A11Q08AI6 406 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 IZUMO4Q1ZYL8 232 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 LRRC75BQ2VPJ9 315 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 C2orf83Q53S99 150 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 SPANXN5Q5MJ07 72 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 PVRIGQ6DKI7 326 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 OR1L6Q8NGR2 347 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 OR2T10Q8NGZ9 312 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 RNASEH2CQ8TDP1 164 aaKnown RBP5.48□□□□□ -1.53
VPS13A-201ENST00000355766 TMED6Q8WW62 240 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 FAM210AQ96ND0 272 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 OR4C12Q96R67 309 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 TBX15Q96SF7 602 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 WDR61Q9GZS3 305 aaKnown RBP5.48□□□□□ -1.53
VPS13A-201ENST00000355766 SMDT1Q9H4I9 107 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 HEYLQ9NQ87 328 aaPredicted RBP5.48□□□□□ -1.53
VPS13A-201ENST00000355766 NDUFA4L2Q9NRX3 87 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 UQCC1Q9NVA1 299 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 FBXO7Q9Y3I1 522 aa5.48□□□□□ -1.53
VPS13A-201ENST00000355766 SACSQ9NZJ4 4579 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 SRRM4A7MD48 611 aaKnown RBP5.47□□□□□ -1.53
VPS13A-201ENST00000355766 C15orf62A8K5M9 175 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 PRSS46E5RG02 174 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 C17orf112F2Z3M2 114 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 RNASEK-C17orf49H0YIS7 233 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 K7EIL1 84 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 RRHO14718 337 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 CST7O76096 145 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 ACTL6BO94805 426 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 METTL15P1P0C7V9 234 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 FAM106CPP0CH98 169 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 IAPPP10997 89 aa5.47□□□□□ -1.53
VPS13A-201ENST00000355766 GPX4P36969 197 aaPredicted RBP5.47□□□□□ -1.53
VPS13A-201ENST00000355766 LINC00205P59089 165 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms