RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 TMEM178AQ8NBL3 297 aa12.21□□□□□ -0.46
TRAF3-202ENST00000351691 SSBP3Q9BWW4 388 aaPredicted RBP12.21□□□□□ -0.46
TRAF3-202ENST00000351691 MAP1LC3CQ9BXW4 147 aa12.21□□□□□ -0.46
TRAF3-202ENST00000351691 C12orf49Q9H741 205 aa12.21□□□□□ -0.46
TRAF3-202ENST00000351691 ENY2Q9NPA8 101 aa12.21□□□□□ -0.46
TRAF3-202ENST00000351691 ZNF355PQ9NSJ1 428 aa12.21□□□□□ -0.46
TRAF3-202ENST00000351691 IDI2-AS1Q9NZ38 188 aa12.21□□□□□ -0.46
TRAF3-202ENST00000351691 C7orf71A4D174 169 aa12.2□□□□□ -0.46
TRAF3-202ENST00000351691 PROP1O75360 226 aa12.2□□□□□ -0.46
TRAF3-202ENST00000351691 COX8AP10176 69 aa12.2□□□□□ -0.46
TRAF3-202ENST00000351691 HSPE1P61604 102 aaKnown RBP12.2□□□□□ -0.46
TRAF3-202ENST00000351691 H1FXQ92522 213 aaKnown RBP12.2□□□□□ -0.46
TRAF3-202ENST00000351691 DPF1Q92782 380 aa12.2□□□□□ -0.46
TRAF3-202ENST00000351691 TMEM14BQ9NUH8 114 aa12.2□□□□□ -0.46
TRAF3-202ENST00000351691 H3BRM9 83 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 C15orf65H3BRN8 121 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 S100A7P31151 101 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 CEBPDP49716 269 aaPredicted RBP12.19□□□□□ -0.46
TRAF3-202ENST00000351691 HBBP68871 147 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 OR1B1Q8NGR6 318 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 SARAFQ96BY9 339 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 SLC25A33Q9BSK2 321 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 DEFB127Q9H1M4 99 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 HSPB8Q9UJY1 196 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 FREM1Q5H8C1 2179 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 TRAV3A0A0B4J244 114 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 C9orf118A6NHY6 69 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 AHRRA9YTQ3 701 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 SAP30O75446 220 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 SMIM17P0DL12 118 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 SCGB1A1P11684 91 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 GPR6P46095 362 aaPredicted RBP12.19□□□□□ -0.46
TRAF3-202ENST00000351691 RBPJQ06330 500 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 NEGR1Q7Z3B1 354 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 TNFRSF14Q92956 283 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 S1PR3Q99500 378 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 C7orf69Q9H7B7 122 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 SPRR3Q9UBC9 169 aa12.19□□□□□ -0.46
TRAF3-202ENST00000351691 HIGD1CA8MV81 97 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 IQCF6A8MYZ5 107 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 CT83Q5H943 113 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 LINC01545Q5VT33 79 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 OR13A1Q8NGR1 328 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 TP73-AS1Q9UF72 201 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 JPT1Q9UK76 154 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 OR51B2Q9Y5P1 312 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 MUC6Q6W4X9 2439 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 PRR33A8MZF0 331 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 RIPPLY3P57055 190 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 TMEM97Q5BJF2 176 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 INO80CQ6PI98 192 aaPredicted RBP12.18□□□□□ -0.46
TRAF3-202ENST00000351691 C2orf91Q6ZV80 131 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 SSX8Q7RTT4 187 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 NDFIP1Q9BT67 221 aa12.18□□□□□ -0.46
TRAF3-202ENST00000351691 AMMECR1Q9Y4X0 333 aaPredicted RBP12.18□□□□□ -0.46
TRAF3-202ENST00000351691 A0A087X0K7 114 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 IGHV3-43A0A0B4J1X8 118 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 FAM231BA6NCW3 169 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 K7EP34 96 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 IGHV3-43DP0DP04 118 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 TCF15Q12870 199 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 ACP7Q6ZNF0 438 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 FAM90A1Q86YD7 464 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 BPIFA4PQ86YQ2 179 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 PRSS33Q8NF86 280 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 DDB2Q92466 427 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 SSBP4Q9BWG4 385 aaPredicted RBP12.17□□□□□ -0.46
TRAF3-202ENST00000351691 CELSR3Q9NYQ7 3312 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 A6NDN8 102 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 PEX7O00628 323 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 HTR1DP28221 377 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 HES3Q5TGS1 186 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 LINC00173Q6ZV60 143 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 FAM167A-AS1Q96KT0 104 aa12.17□□□□□ -0.46
TRAF3-202ENST00000351691 Q6ZR03 302 aa12.16□□□□□ -0.46
TRAF3-202ENST00000351691 OR5A1Q8NGJ0 315 aa12.16□□□□□ -0.46
TRAF3-202ENST00000351691 AP1S3Q96PC3 154 aa12.16□□□□□ -0.46
TRAF3-202ENST00000351691 CUL9Q8IWT3 2517 aa12.16□□□□□ -0.46
TRAF3-202ENST00000351691 AHCTF1Q8WYP5 2266 aa12.16□□□□□ -0.46
TRAF3-202ENST00000351691 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-202ENST00000351691 SH2D7A6NKC9 451 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-202ENST00000351691 DEFB108AA8MXU0 73 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 GRPP07492 148 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 COL8A2P25067 703 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 CAMPP49913 170 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 POU2AF1Q16633 256 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 CR1LQ2VPA4 569 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 DHRS13Q6UX07 377 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 ZNF329Q86UD4 541 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 VKORC1L1Q8N0U8 176 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 SLC25A2Q9BXI2 301 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 CNTRLQ7Z7A1 2325 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 VWC2LB2RUY7 222 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 IGHG3P01860 377 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 IGHV1-2P23083 117 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 C11orf53Q8IXP5 236 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 C5orf17Q8NAS9 161 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 ZNF714Q96N38 554 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 GFRA4Q9GZZ7 299 aa12.15□□□□□ -0.46
TRAF3-202ENST00000351691 ZNF257Q9Y2Q1 563 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms