RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 PLGLB1Q02325 96 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 CEACAM16Q2WEN9 425 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 CT83Q5H943 113 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF788Q6ZQV5 615 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 LCNL1Q6ZST4 164 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 BOD1L2Q8IYS8 172 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 GCSAMQ8N6F7 178 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 KIR3DL3Q8N743 410 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 STPG3Q8N7X2 389 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 DEFB124Q8NES8 71 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 NUP35Q8NFH5 326 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 MS4A5Q9H3V2 200 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 LSM4Q9Y4Z0 139 aaKnown RBP6.7□□□□□ -1.34
ATG4A-201ENST00000343524 LAMA5O15230 3695 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.7□□□□□ -1.34
ATG4A-201ENST00000343524 KLRC4-KLRK1H3BQV0 150 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 K7ESF4 209 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 SMAD7O15105 426 aaKnown RBP6.7□□□□□ -1.34
ATG4A-201ENST00000343524 IGLV2-8P01709 118 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 FAM87AP0C7U9 286 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF32P17041 273 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF816Q0VGE8 651 aaPredicted RBP6.7□□□□□ -1.34
ATG4A-201ENST00000343524 PSG5Q15238 335 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 ADAMTSL5Q6ZMM2 481 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 SSX8Q7RTT4 187 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 ANKRD37Q7Z713 158 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 Q8IYB0 196 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 TEX45Q8NA69 505 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 LRRC29Q8WV35 223 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF479Q96JC4 524 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 HSD17B10Q99714 261 aaKnown RBP6.7□□□□□ -1.34
ATG4A-201ENST00000343524 VGLL1Q99990 258 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 NDFIP1Q9BT67 221 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 PKIBQ9C010 78 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 OR2H1Q9GZK4 316 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 TP73-AS1Q9UF72 201 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 RABAC1Q9UI14 185 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 CYSLTR1Q9Y271 337 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 ASXL3Q9C0F0 2248 aa6.7□□□□□ -1.34
ATG4A-201ENST00000343524 TDRD6O60522 2096 aaKnown RBP6.69□□□□□ -1.34
ATG4A-201ENST00000343524 TRAV24A0A0B4J272 114 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 TRGV8A0A0C4DH27 118 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 CRYGCP07315 174 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 FASLGP48023 281 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 RAC3P60763 192 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 NRN1LQ496H8 165 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.69□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF497Q6ZNH5 498 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 C20orf204Q6ZNR8 217 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 YAF2Q8IY57 180 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 TTC9CQ8N5M4 171 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 FADS6Q8N9I5 356 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 OR10D3Q8NH80 312 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF502Q8TBZ5 544 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.69□□□□□ -1.34
ATG4A-201ENST00000343524 URB1-AS1Q96HZ7 61 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 MRPL32Q9BYC8 188 aaKnown RBP6.69□□□□□ -1.34
ATG4A-201ENST00000343524 GFRA4Q9GZZ7 299 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 VCX2Q9H322 139 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 GCM1Q9NP62 436 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 HEYLQ9NQ87 328 aaPredicted RBP6.69□□□□□ -1.34
ATG4A-201ENST00000343524 SPANXB1Q9NS25 103 aaPredicted RBP6.69□□□□□ -1.34
ATG4A-201ENST00000343524 DEPPQ9NTK1 212 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 MBNL3Q9NUK0 354 aaKnown RBP6.69□□□□□ -1.34
ATG4A-201ENST00000343524 IDI2-AS1Q9NZ38 188 aa6.69□□□□□ -1.34
ATG4A-201ENST00000343524 MYO7BQ6PIF6 2116 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 hADV38S2A0JD32 116 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 PRSS46E5RG02 174 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 CT45A10P0DMU9 189 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 FGF6P10767 208 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 ARL4DP49703 201 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 MEF2CQ06413 473 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-201ENST00000343524 EIF4EBP1Q13541 118 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-201ENST00000343524 SPEM1Q8N4L4 309 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 OR1L3Q8NH93 324 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 SNRNP40Q96DI7 357 aaKnown RBP6.68□□□□□ -1.34
ATG4A-201ENST00000343524 SPACA9Q96E40 222 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-201ENST00000343524 ABHD17AQ96GS6 310 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 GPR82Q96P67 336 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 SPANXA1Q9NS26 97 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 DKK4Q9UBT3 224 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 JPT1Q9UK76 154 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 FREM2Q5SZK8 3169 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 A0A1B0GX78 115 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 HIGD1CA8MV81 97 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 CA1P00915 261 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-201ENST00000343524 IGHV3-7P01780 117 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 CAMPP49913 170 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 ERVK-16P61578 105 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 CFHR1Q03591 330 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 SRSF6Q13247 344 aaKnown RBP6.68□□□□□ -1.34
ATG4A-201ENST00000343524 LGALS9BQ3B8N2 356 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 LGALS9CQ6DKI2 356 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF808Q8N4W9 903 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-201ENST00000343524 GALMQ96C23 342 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 FOXB1Q99853 325 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF355PQ9NSJ1 428 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 MPC1Q9Y5U8 109 aa6.68□□□□□ -1.34
ATG4A-201ENST00000343524 DOPEY1Q5JWR5 2465 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 KBTBD11-OT1A0A1B0GTJ5 212 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms