RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MYMXA0A1B0GTQ4 84 aa14.96□□□□□ -0.01
SMAD4-201ENST00000342988 NDUFAF3Q9BU61 184 aa14.96□□□□□ -0.01
SMAD4-201ENST00000342988 CBLN3Q6UW01 205 aa14.96□□□□□ -0.01
SMAD4-201ENST00000342988 UMODP07911 640 aa14.96□□□□□ -0.02
SMAD4-201ENST00000342988 CCL1P22362 96 aa14.96□□□□□ -0.02
SMAD4-201ENST00000342988 PLPPR1Q8TBJ4 325 aa14.96□□□□□ -0.02
SMAD4-201ENST00000342988 IGHV3-66A0A0C4DH42 116 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 ZP4Q12836 540 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 NCOR1P1Q9H4R4 102 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 NYNRINQ9P2P1 1898 aaKnown RBP14.95□□□□□ -0.02
SMAD4-201ENST00000342988 CGAP01215 116 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 SEC61GP60059 68 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 GTSF1LQ9H1H1 148 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 NKAPP1Q8N9T2 125 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 CRYGNQ8WXF5 182 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 MMP23AO75900 390 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 SPRED2Q7Z698 418 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 IGHV3-64A0A075B6Q5 118 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 MYF5P13349 255 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 CD160O95971 181 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 RASL11AQ6T310 242 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 ZNF114Q8NC26 417 aa14.95□□□□□ -0.02
SMAD4-201ENST00000342988 WNT2BQ93097 391 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 IFI27L1Q96BM0 104 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 UCN2Q96RP3 112 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 C5orf47Q569G3 176 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 FAM168AQ92567 244 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 HLA-DQB1P01920 261 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 PNKDQ8N490 385 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 TCF20Q9UGU0 1960 aaKnown RBP14.94□□□□□ -0.02
SMAD4-201ENST00000342988 IRF3Q14653 427 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 TRBV20-1A0A075B6N2 111 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 C1QTNF9P0C862 333 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 THAP8Q8NA92 274 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 SCO2A0A1W2PP80 73 aa14.94□□□□□ -0.02
SMAD4-201ENST00000342988 IGLV3-16A0A075B6K0 115 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 C1QTNF12Q5T7M4 302 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 IGHV5-10-1A0A0J9YXX1 117 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 IGKV1D-33P01593 117 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 IGKV1-33P01594 117 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 NPC2P61916 151 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 ZNF703Q9H7S9 590 aaPredicted RBP14.93□□□□□ -0.02
SMAD4-201ENST00000342988 A0A0G2JMM0 328 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 A0A1W2PPB8 328 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 NPIPB13A6NJU9 1138 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 KIR3DP1A8MWS1 328 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 H3BTX0 84 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 FGF11Q92914 225 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 SPG11Q96JI7 2443 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 TRAV8-3A0A0A6YYJ7 113 aa14.93□□□□□ -0.02
SMAD4-201ENST00000342988 CCL3P10147 92 aa14.92□□□□□ -0.02
SMAD4-201ENST00000342988 CTGFP29279 349 aa14.92□□□□□ -0.02
SMAD4-201ENST00000342988 RBM3P98179 157 aaKnown RBP14.92□□□□□ -0.02
SMAD4-201ENST00000342988 PILRBQ9UKJ0 227 aa14.92□□□□□ -0.02
SMAD4-201ENST00000342988 COX5BP10606 129 aa14.92□□□□□ -0.02
SMAD4-201ENST00000342988 TPRX1Q8N7U7 411 aa14.92□□□□□ -0.02
SMAD4-201ENST00000342988 NEU4Q8WWR8 484 aaPredicted RBP14.92□□□□□ -0.02
SMAD4-201ENST00000342988 RCC1LQ96I51 464 aaKnown RBP14.92□□□□□ -0.02
SMAD4-201ENST00000342988 CLEC19AQ6UXS0 136 aa14.92□□□□□ -0.02
SMAD4-201ENST00000342988 DPM3Q9P2X0 92 aa14.92□□□□□ -0.02
SMAD4-201ENST00000342988 LHBP01229 141 aa14.92□□□□□ -0.02
SMAD4-201ENST00000342988 EVI2AP22794 236 aa14.92□□□□□ -0.02
SMAD4-201ENST00000342988 RPL36AP83881 106 aaKnown RBP14.92□□□□□ -0.02
SMAD4-201ENST00000342988 ZNF124Q15973 351 aa14.92□□□□□ -0.02
SMAD4-201ENST00000342988 RPL36ALQ969Q0 106 aaKnown RBP14.92□□□□□ -0.02
SMAD4-201ENST00000342988 DLL3Q9NYJ7 618 aa14.92□□□□□ -0.02
SMAD4-201ENST00000342988 A0A1W2PPC1 479 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 TCRBV4S1A1TA0A5B7 111 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 SERF1AO75920 110 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 PVRIGQ6DKI7 326 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 A8MXK9 166 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 IGLV3-25P01717 112 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 C1QTNF4Q9BXJ3 329 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 VWA8A3KMH1 1905 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 FXYD1O00168 92 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 NEUROG3Q9Y4Z2 214 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 TMEM240Q5SV17 173 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 PRSS41Q7RTY9 318 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 C1orf43Q9BWL3 253 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 C5orf66Q9H5L9 145 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 FAM90A9PA6NNJ1 464 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 APOBEC3AP31941 199 aaPredicted RBP14.91□□□□□ -0.02
SMAD4-201ENST00000342988 IFI27L2Q9H2X8 130 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 LCTP09848 1927 aa14.91□□□□□ -0.02
SMAD4-201ENST00000342988 KIAA1551Q9HCM1 1747 aa14.9□□□□□ -0.02
SMAD4-201ENST00000342988 UTF1Q5T230 341 aa14.9□□□□□ -0.02
SMAD4-201ENST00000342988 PSG4Q00888 419 aa14.9□□□□□ -0.02
SMAD4-201ENST00000342988 IGHV3-49A0A0A0MS15 119 aa14.9□□□□□ -0.02
SMAD4-201ENST00000342988 TRAV14DV4A0A0A6YYC5 116 aa14.9□□□□□ -0.02
SMAD4-201ENST00000342988 SMAD7O15105 426 aaKnown RBP14.9□□□□□ -0.02
SMAD4-201ENST00000342988 LHX2P50458 406 aa14.9□□□□□ -0.02
SMAD4-201ENST00000342988 TRPM3Q9HCF6 1732 aaPredicted RBP14.9□□□□□ -0.02
SMAD4-201ENST00000342988 C15orf61A6NNL5 157 aa14.9□□□□□ -0.02
SMAD4-201ENST00000342988 NHLRC3Q5JS37 347 aa14.9□□□□□ -0.02
SMAD4-201ENST00000342988 OVOL1O14753 267 aa14.9□□□□□ -0.02
SMAD4-201ENST00000342988 A0A0U1RRA0 63 aa14.89□□□□□ -0.03
SMAD4-201ENST00000342988 NEGR1Q7Z3B1 354 aa14.89□□□□□ -0.03
SMAD4-201ENST00000342988 ZNF625Q96I27 306 aaPredicted RBP14.89□□□□□ -0.03
SMAD4-201ENST00000342988 GLRXP35754 106 aa14.89□□□□□ -0.03
SMAD4-201ENST00000342988 SIGLEC15Q6ZMC9 328 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms