RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 EFNB3Q15768 340 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 MBNL3Q9NUK0 354 aaKnown RBP12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 PLCE1Q9P212 2302 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 TRAV3A0A0B4J244 114 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 IGKV1-6A0A0C4DH72 117 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 IGHV3-11P01762 117 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 CDX1P47902 265 aaPredicted RBP12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 HIST1H1AQ02539 215 aaPredicted RBP12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 TCRBV4S1A1TA0A5B7 111 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 E7EQL1 145 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 MBD3L1Q8WWY6 194 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 C2orf16Q68DN1 1984 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 HLA-DRB1P01911 266 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 RPL23P62829 140 aaKnown RBP12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 Q1RN00 199 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 DDB2Q92466 427 aa12.86□□□□□ -0.35
CARMIL3-201ENST00000342740 C1QTNF9BB2RNN3 333 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 TMEM14EPQ6UXP3 125 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 A0A0G2JRQ6 117 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 G0S2P27469 103 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 NBL1P41271 181 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 SRSF4Q08170 494 aaKnown RBP12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 Q6ZRM9 215 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 PIEZO1Q92508 2521 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 PKIAP61925 76 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 PRSS8Q16651 343 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 LEMD1Q68G75 181 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 LYPD2Q6UXB3 125 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 Q6ZR03 302 aa12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 SLC25A48Q6ZT89 311 aaKnown RBP12.85□□□□□ -0.35
CARMIL3-201ENST00000342740 TRBV9A0A0B4J1U6 114 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 IL36BQ9NZH7 164 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 A0A087WWC5 75 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 LEPROTL1O95214 131 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 COL8A2P25067 703 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 CEACAM8P31997 349 aaPredicted RBP12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 TAS2R60P59551 318 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 SNRPD3P62318 126 aaKnown RBP12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 ZNF841Q6ZN19 808 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 RNF125Q96EQ8 232 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 GGTLC1Q9BX51 225 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 Q9H3A6 140 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 OTOGLQ3ZCN5 2332 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 IGKV3-20P01619 116 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 RNF224P0DH78 156 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 PYYP10082 97 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 C2orf83Q53S99 150 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 IGHV1-3A0A0C4DH29 117 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 TDGF1P13385 188 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 BTF3P20290 206 aaKnown RBP12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 SCGB1D4Q6XE38 83 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 PRSS33Q8NF86 280 aa12.84□□□□□ -0.35
CARMIL3-201ENST00000342740 TRAV40A0A0B4J280 105 aa12.83□□□□□ -0.35
CARMIL3-201ENST00000342740 DKK1O94907 266 aa12.83□□□□□ -0.35
CARMIL3-201ENST00000342740 RPP25LQ8N5L8 163 aaKnown RBP12.83□□□□□ -0.35
CARMIL3-201ENST00000342740 RNF138Q8WVD3 245 aa12.83□□□□□ -0.35
CARMIL3-201ENST00000342740 GPR82Q96P67 336 aa12.83□□□□□ -0.35
CARMIL3-201ENST00000342740 YLPM1P49750 1951 aaKnown RBP12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 IGHV3OR16-12A0A075B7B8 117 aa12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 LMO1P25800 156 aa12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 HBBP68871 147 aa12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 RHOGP84095 191 aa12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 RFNGQ9Y644 331 aa12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 LTBP2Q14767 1821 aa12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 FOXA3P55318 350 aaPredicted RBP12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 PVRIGQ6DKI7 326 aa12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 ANKHD1Q8IWZ3 2542 aaKnown RBP12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 WT1P19544 449 aaPredicted RBP12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 KLRD1Q13241 179 aa12.83□□□□□ -0.36
CARMIL3-201ENST00000342740 A0A1W2PRE2 83 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 HERVK_113P61574 105 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 TCF24Q7RTU0 167 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 TMEM167AQ8TBQ9 72 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 FAM215AQ9Y5M1 114 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 IFITM10A6NMD0 228 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 CD5P06127 495 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 TSPOP30536 169 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 SYT8Q8NBV8 401 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 ZNF585BQ52M93 769 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 ELOVL1Q9BW60 279 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 TUBA4BQ9H853 241 aa12.82□□□□□ -0.36
CARMIL3-201ENST00000342740 H0YJW9 148 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 C1QTNF9P0C862 333 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 WDR86Q86TI4 376 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 WNT2P09544 360 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 SCGB1C2P0DMR2 95 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 MYOD1P15172 320 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 FOSL1P15407 271 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 DUX5Q96PT3 197 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 CRIM1Q9NZV1 1036 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 DOCK11Q5JSL3 2073 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 M0QZK8 103 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 TPTE2P1Q5T6R2 138 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 VMO1Q7Z5L0 202 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 MAP1LC3AQ9H492 121 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 FAM159AQ6UWV7 190 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 RAX2Q96IS3 184 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 ANAPC10Q9UM13 185 aa12.81□□□□□ -0.36
CARMIL3-201ENST00000342740 PGPEP1LA6NFU8 196 aa12.8□□□□□ -0.36
CARMIL3-201ENST00000342740 GNG5P63218 68 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms