RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 OR8B2Q96RD0 313 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 SLC25A22Q9H936 323 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 SLC35D1Q9NTN3 355 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 TMEM241Q24JQ0 296 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 P2RX4Q99571 388 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 SMIM7Q9BQ49 75 aa10.66□□□□□ -0.7
COL18A1-201ENST00000342220 PATZ1Q9HBE1 687 aaKnown RBP10.66□□□□□ -0.7
COL18A1-201ENST00000342220 H7BYZ3 331 aa10.65□□□□□ -0.7
COL18A1-201ENST00000342220 HNRNPA3P51991 378 aaKnown RBP10.65□□□□□ -0.7
COL18A1-201ENST00000342220 ACOT6Q3I5F7 207 aaPredicted RBP10.65□□□□□ -0.7
COL18A1-201ENST00000342220 TMEM14EPQ6UXP3 125 aa10.65□□□□□ -0.7
COL18A1-201ENST00000342220 GATAD1Q8WUU5 269 aa10.65□□□□□ -0.7
COL18A1-201ENST00000342220 PINX1Q96BK5 328 aaKnown RBP10.65□□□□□ -0.7
COL18A1-201ENST00000342220 RPUSD4Q96CM3 377 aaKnown RBP10.65□□□□□ -0.7
COL18A1-201ENST00000342220 MRPL20Q9BYC9 149 aaKnown RBP10.65□□□□□ -0.7
COL18A1-201ENST00000342220 IGHV3-21A0A0B4J1V1 117 aa10.65□□□□□ -0.7
COL18A1-201ENST00000342220 RAB29O14966 203 aa10.65□□□□□ -0.7
COL18A1-201ENST00000342220 PROP1O75360 226 aa10.65□□□□□ -0.7
COL18A1-201ENST00000342220 IFNA1P01562 189 aa10.65□□□□□ -0.7
COL18A1-201ENST00000342220 BPESC1Q9GZL8 116 aa10.65□□□□□ -0.7
COL18A1-201ENST00000342220 CST9LQ9H4G1 147 aa10.65□□□□□ -0.7
COL18A1-201ENST00000342220 LAMTOR2Q9Y2Q5 125 aa10.65□□□□□ -0.7
COL18A1-201ENST00000342220 MSMO1Q15800 293 aa10.65□□□□□ -0.71
COL18A1-201ENST00000342220 TCF23Q7RTU1 214 aa10.65□□□□□ -0.71
COL18A1-201ENST00000342220 LINC01551Q86U37 167 aa10.65□□□□□ -0.71
COL18A1-201ENST00000342220 QTRT1Q9BXR0 403 aaKnown RBP10.65□□□□□ -0.71
COL18A1-201ENST00000342220 JPT1Q9UK76 154 aa10.65□□□□□ -0.71
COL18A1-201ENST00000342220 COX11Q9Y6N1 276 aa10.65□□□□□ -0.71
COL18A1-201ENST00000342220 PFN1P07737 140 aaKnown RBP10.64□□□□□ -0.71
COL18A1-201ENST00000342220 ATP5J2P56134 94 aa10.64□□□□□ -0.71
COL18A1-201ENST00000342220 FAM3BP58499 235 aaPredicted RBP10.64□□□□□ -0.71
COL18A1-201ENST00000342220 C3orf36Q3SXR2 165 aa10.64□□□□□ -0.71
COL18A1-201ENST00000342220 IFI27L2Q9H2X8 130 aa10.64□□□□□ -0.71
COL18A1-201ENST00000342220 FCN3O75636 299 aa10.64□□□□□ -0.71
COL18A1-201ENST00000342220 DEFA4P12838 97 aa10.64□□□□□ -0.71
COL18A1-201ENST00000342220 LOXP28300 417 aaPredicted RBP10.64□□□□□ -0.71
COL18A1-201ENST00000342220 DUTP33316 252 aaKnown RBP10.64□□□□□ -0.71
COL18A1-201ENST00000342220 LOXL3P58215 753 aa10.64□□□□□ -0.71
COL18A1-201ENST00000342220 MEF2BQ02080 365 aaPredicted RBP10.64□□□□□ -0.71
COL18A1-201ENST00000342220 TFF3Q07654 80 aa10.64□□□□□ -0.71
COL18A1-201ENST00000342220 AGMATQ9BSE5 352 aa10.64□□□□□ -0.71
COL18A1-201ENST00000342220 ACTL6BO94805 426 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 GOSR1O95249 250 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 CFHR2P36980 270 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 TPTE2P1Q5T6R2 138 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 TEX43Q6ZNM6 134 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 ZNF596Q8TC21 504 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 HARBI1Q96MB7 349 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 HSPB9Q9BQS6 159 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 CTDSP1Q9GZU7 261 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 HSPB7Q9UBY9 170 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 NAT8Q9UHE5 227 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 NOTCH3Q9UM47 2321 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 FAM90A26D6RGX4 464 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 REG1AP05451 166 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 OR9G9P0C7N8 305 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 Q6ZWC4 215 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 CMTM2Q8TAZ6 248 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 BTF3L4Q96K17 158 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 ENY2Q9NPA8 101 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 TMEM8BA6NDV4 472 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 BRWD1-AS2P59051 145 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 C10orf55Q5SWW7 151 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 HSD17B10Q99714 261 aaKnown RBP10.63□□□□□ -0.71
COL18A1-201ENST00000342220 TNFRSF19Q9NS68 423 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 LINC00312Q9Y6C7 94 aa10.63□□□□□ -0.71
COL18A1-201ENST00000342220 IGHV2-70DA0A0C4DH43 119 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 GRIFINA4D1Z8 144 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 ACTL10Q5JWF8 245 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 OR10G9Q8NGN4 311 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 OR10G7Q8NGN6 311 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 RPEQ96AT9 228 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 CCL19Q99731 98 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 TMEM140Q9NV12 185 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 RPUSD1Q9UJJ7 312 aaKnown RBP10.62□□□□□ -0.71
COL18A1-201ENST00000342220 SLC25A17O43808 307 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 RPL23P62829 140 aaKnown RBP10.62□□□□□ -0.71
COL18A1-201ENST00000342220 FFAR4Q5NUL3 377 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 TRAT1Q6PIZ9 186 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 CYP2G1PQ6ZSU1 146 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 OR51G1Q8NGK1 321 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 OR4F5Q8NH21 305 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 OR4F4Q96R69 305 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.62□□□□□ -0.71
COL18A1-201ENST00000342220 TANC2Q9HCD6 1990 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 C22orf46C9J442 243 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 KBTBD11O94819 623 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 TOMM40O96008 361 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 P0C879 139 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 PSG1P11464 419 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 PSMB3P49720 205 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 BSXQ3C1V8 233 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 FBXL19-AS1Q494R0 122 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 Q8TCH9 128 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 TIMM9Q9Y5J7 89 aa10.62□□□□□ -0.71
COL18A1-201ENST00000342220 PMS2P5A8MQ11 134 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 APOA2P02652 100 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 LGALS4P56470 323 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 SPATA45Q537H7 98 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 ZNF843Q8N446 348 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms