RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TMEM68Q96MH6 324 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 DUX5Q96PT3 197 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 CITED4Q96RK1 184 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 VSIRQ9H7M9 311 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 MXRA5Q9NR99 2828 aa11.59□□□□□ -0.55
CDK5RAP3-201ENST00000338399 IGLV11-55A0A075B6I3 123 aa11.58□□□□□ -0.56
CDK5RAP3-201ENST00000338399 UMAD1C9J7I0 102 aa11.58□□□□□ -0.56
CDK5RAP3-201ENST00000338399 CAMLGP49069 296 aa11.58□□□□□ -0.56
CDK5RAP3-201ENST00000338399 RND2P52198 227 aa11.58□□□□□ -0.56
CDK5RAP3-201ENST00000338399 ELLP55199 621 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-201ENST00000338399 SERF2P84101 59 aa11.58□□□□□ -0.56
CDK5RAP3-201ENST00000338399 GGTLC1Q9BX51 225 aa11.58□□□□□ -0.56
CDK5RAP3-201ENST00000338399 OTOGQ6ZRI0 2925 aa11.58□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TRAV41A0A0B4J266 112 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 RAB5CP51148 216 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 ACSM6Q6P461 480 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 Q6ZRG5 221 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 FAM213BQ8TBF2 198 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 ZNF355PQ9NSJ1 428 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TMEM160Q9NX00 188 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 K7EIM0 57 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 CYB5BO43169 146 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 IGF1P05019 195 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 OR10J1P30954 320 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 CRIP2P52943 208 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 DEFA5Q01523 94 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 RAB31Q13636 194 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 FFAR4Q5NUL3 377 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 MIC13Q5XKP0 118 aa11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 RBMS3Q6XE24 437 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 SAT2Q96F10 170 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-201ENST00000338399 LINC00862A6NCI5 91 aa11.56□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TEX46H3BTG2 121 aa11.56□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TRIM77I1YAP6 450 aa11.56□□□□□ -0.56
CDK5RAP3-201ENST00000338399 OR2J3O76001 311 aa11.56□□□□□ -0.56
CDK5RAP3-201ENST00000338399 CD99P14209 185 aa11.56□□□□□ -0.56
CDK5RAP3-201ENST00000338399 BLOC1S1P78537 153 aa11.56□□□□□ -0.56
CDK5RAP3-201ENST00000338399 C19orf54Q5BKX5 351 aa11.56□□□□□ -0.56
CDK5RAP3-201ENST00000338399 NOL4LQ96MY1 436 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-201ENST00000338399 RPRMQ9NS64 109 aa11.56□□□□□ -0.56
CDK5RAP3-201ENST00000338399 PXMP4Q9Y6I8 212 aa11.56□□□□□ -0.56
CDK5RAP3-201ENST00000338399 S4R3C0 116 aa11.56□□□□□ -0.56
CDK5RAP3-201ENST00000338399 NDUFB8O95169 186 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 ZNF616Q08AN1 781 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 PXDC1Q5TGL8 231 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TMEM116Q8NCL8 245 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 THYN1Q9P016 225 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 SLC45A2Q9UMX9 530 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 IGKV1D-37A0A075B6S9 117 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 ZFP92A6NM28 416 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 AP4M1O00189 453 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 SOX15O60248 233 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TSPAN9O75954 239 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 HIST1H1BP16401 226 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 GATA2P23769 480 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 RAB2AP61019 212 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 B2MP61769 119 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TMEM41BQ5BJD5 291 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 Q71RC1 249 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TMEM86BQ8N661 226 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 THAP8Q8NA92 274 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 HRH4Q9H3N8 390 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 GSX1Q9H4S2 264 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 FBXL7Q9UJT9 491 aa11.55□□□□□ -0.56
CDK5RAP3-201ENST00000338399 FLNBO75369 2602 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-201ENST00000338399 BAHCC1Q9P281 2608 aa11.54□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TSPAN15O95858 294 aa11.54□□□□□ -0.56
CDK5RAP3-201ENST00000338399 RPL29P47914 159 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TMEM95Q3KNT9 176 aa11.54□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TOR2AQ5JU69 321 aa11.54□□□□□ -0.56
CDK5RAP3-201ENST00000338399 STPG3Q8N7X2 389 aa11.54□□□□□ -0.56
CDK5RAP3-201ENST00000338399 BPIFCQ8NFQ6 507 aa11.54□□□□□ -0.56
CDK5RAP3-201ENST00000338399 OR4X1Q8NH49 305 aa11.54□□□□□ -0.56
CDK5RAP3-201ENST00000338399 MS4A10Q96PG2 267 aa11.54□□□□□ -0.56
CDK5RAP3-201ENST00000338399 KCNIP2Q9NS61 270 aa11.54□□□□□ -0.56
CDK5RAP3-201ENST00000338399 MFSD2BA6NFX1 497 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 YIF1AO95070 293 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 MBP02144 154 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 LINC00869P0C866 280 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 SRD5A1P18405 259 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 RHOGP84095 191 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 PRR20EP86478 221 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 PRR20CP86479 221 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 PRR20DP86480 221 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 PRR20BP86481 221 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 PRR20AP86496 221 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 ZNF90Q03938 601 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 GCSAMLQ5JQS6 135 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 DPPA3Q6W0C5 159 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 CYP2G1PQ6ZSU1 146 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 OR10G4Q8NGN3 311 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 OR10G9Q8NGN4 311 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 OR10G7Q8NGN6 311 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 PRSS22Q9GZN4 317 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 NPFFR1Q9GZQ6 430 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TRBV9A0A0B4J1U6 114 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 TCRBV4S1A1TA0A5B7 111 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 DNAJC9-AS1A6NH13 148 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 FOSL1P15407 271 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 PPIFP30405 207 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms