RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ARFGEF3Q5TH69 2177 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 ZNF785A8K8V0 405 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 SYS1-DBNDD2H3BUS1 97 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 C18orf32Q8TCD1 76 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 MYOZ3Q8TDC0 251 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 PYGO2Q9BRQ0 406 aa11.04□□□□□ -0.64
COL2A1-201ENST00000337299 DNPH1O43598 174 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 YPEL3P61236 119 aaPredicted RBP11.03□□□□□ -0.64
COL2A1-201ENST00000337299 LINC00305Q7Z4B0 112 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 ZNRF1Q8ND25 227 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 NABP1Q96AH0 204 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 BRCA2P51587 3418 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 CRYGSP22914 178 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 RPL15P61313 204 aaKnown RBP11.03□□□□□ -0.64
COL2A1-201ENST00000337299 SAMD5Q5TGI4 173 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 SNRNP40Q96DI7 357 aaKnown RBP11.03□□□□□ -0.64
COL2A1-201ENST00000337299 MGST2Q99735 147 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 SCRT1Q9BWW7 348 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 CHCHD2Q9Y6H1 151 aaPredicted RBP11.03□□□□□ -0.64
COL2A1-201ENST00000337299 IL18BPO95998 194 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 ACP1P24666 158 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 NTF4P34130 210 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 SEC11AP67812 179 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 KIR3DS1Q14943 382 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 ZNF585BQ52M93 769 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 ZADH2Q8N4Q0 377 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 OR10W1Q8NGF6 305 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 RPP21Q9H633 154 aaKnown RBP11.03□□□□□ -0.64
COL2A1-201ENST00000337299 ATRXP46100 2492 aa11.03□□□□□ -0.64
COL2A1-201ENST00000337299 K7ESF4 209 aa11.02□□□□□ -0.64
COL2A1-201ENST00000337299 CD5LO43866 347 aa11.02□□□□□ -0.64
COL2A1-201ENST00000337299 KIR2DL2P43627 348 aaPredicted RBP11.02□□□□□ -0.64
COL2A1-201ENST00000337299 FOXG1P55316 489 aaPredicted RBP11.02□□□□□ -0.64
COL2A1-201ENST00000337299 HOXA4Q00056 320 aaPredicted RBP11.02□□□□□ -0.64
COL2A1-201ENST00000337299 FAM53AQ6NSI3 398 aaPredicted RBP11.02□□□□□ -0.64
COL2A1-201ENST00000337299 SLC25A33Q9BSK2 321 aa11.02□□□□□ -0.64
COL2A1-201ENST00000337299 RANBP2P49792 3224 aaKnown RBP11.02□□□□□ -0.65
COL2A1-201ENST00000337299 FNDC1Q4ZHG4 1894 aaPredicted RBP11.02□□□□□ -0.65
COL2A1-201ENST00000337299 LOC105371242A0A075B767 164 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 PPIAL4CA0A0B4J2A2 164 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 TMEM189A5PLL7 270 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 NCBP2LA6PVI3 153 aaKnown RBP11.02□□□□□ -0.65
COL2A1-201ENST00000337299 NBEAP1P0C6P0 100 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 PPIAL4GP0DN37 164 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 SSPNQ14714 243 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 FBXW9Q5XUX1 488 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 TMUB1Q9BVT8 246 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 CHRNA10Q9GZZ6 450 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 MKI67P46013 3256 aaKnown RBP11.02□□□□□ -0.65
COL2A1-201ENST00000337299 ZNF716A6NP11 495 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 FRMD6-AS1P0C7T7 363 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 PILRBQ9UKJ0 227 aa11.02□□□□□ -0.65
COL2A1-201ENST00000337299 C19orf67A6NJJ6 358 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 MEOX1P50221 254 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 SLAQ13239 276 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 C2orf83Q53S99 150 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 LYRM7Q5U5X0 104 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 RASL11BQ9BPW5 248 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 IGKV1-39P01597 117 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 IGKV1D-39P04432 117 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 BMI1P35226 326 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 NUP35Q8NFH5 326 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 C1QTNF5Q9BXJ0 243 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.01□□□□□ -0.652e-9■■■□□ 16.7
COL2A1-201ENST00000337299 A0A0G2JMM0 328 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 A0A1W2PPB8 328 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 KIR3DP1A8MWS1 328 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 K7EP13 123 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 COX7A1P24310 79 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 TTC32Q5I0X7 151 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 HES7Q9BYE0 225 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 ZGRF1Q86YA3 2104 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 TRAV3A0A0B4J244 114 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 RPL13AP40429 203 aaKnown RBP11.01□□□□□ -0.65
COL2A1-201ENST00000337299 FOXC1Q12948 553 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 PRELID3AQ96N28 172 aa11.01□□□□□ -0.65
COL2A1-201ENST00000337299 PCNX2A6NKB5 2137 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 DENND4CQ5VZ89 1909 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 IGHV2-70DA0A0C4DH43 119 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 MGST3O14880 152 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 MYOD1P15172 320 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 CCL17Q92583 94 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 PLXNA4Q9HCM2 1894 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 CALYQ9NYX4 217 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 PDLIM4P50479 330 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 RBPMS2Q6ZRY4 209 aaKnown RBP11□□□□□ -0.65
COL2A1-201ENST00000337299 ZIC4Q8N9L1 334 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 OR5A1Q8NGJ0 315 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 VSTM2AQ8TAG5 236 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 RPEQ96AT9 228 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 MRPL16Q9NX20 251 aaKnown RBP11□□□□□ -0.65
COL2A1-201ENST00000337299 HIGD1AQ9Y241 93 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 IGHV2-26A0A0B4J1V2 119 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 C15orf62A8K5M9 175 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 NPPCP23582 126 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 LYPD6Q86Y78 171 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 ZNF441Q8N8Z8 693 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 CCL13Q99616 98 aa11□□□□□ -0.65
COL2A1-201ENST00000337299 APOMO95445 188 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms