RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 FAM78BQ5VT40 261 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 MORN5Q5VZ52 161 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 OR8B3Q8NGG8 313 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 OR4P4Q8NGL7 312 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 NRGNQ92686 78 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 OR8B2Q96RD0 313 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 PCGF1Q9BSM1 259 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 ELOVL1Q9BW60 279 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 MOSP00540 346 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 NPPCP23582 126 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 PRCDQ00LT1 54 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 MEF2BQ02080 365 aaPredicted RBP10.14□□□□□ -0.79
LIMK1-201ENST00000336180 HES1Q14469 280 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 C4orf17Q53FE4 359 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 ST6GALNAC6Q969X2 333 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 RPEQ96AT9 228 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 VAX2Q9UIW0 290 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 WASHC3Q9Y3C0 194 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 ABCA12Q86UK0 2595 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 H3BTX0 84 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 CYB5BO43169 146 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 ZNF90Q03938 601 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 FBXL19-AS1Q494R0 122 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 OR4C13Q8NGP0 309 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 ITLN2Q8WWU7 325 aaPredicted RBP10.13□□□□□ -0.79
LIMK1-201ENST00000336180 FNDC4Q9H6D8 234 aaPredicted RBP10.13□□□□□ -0.79
LIMK1-201ENST00000336180 CBLN4Q9NTU7 201 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 A0A1W2PPI3 338 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 C11orf94C9JXX5 98 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 IGLV2-23P01705 113 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 RNASE2P10153 161 aaKnown RBP10.13□□□□□ -0.79
LIMK1-201ENST00000336180 ZFP36P26651 326 aaKnown RBP10.13□□□□□ -0.79
LIMK1-201ENST00000336180 PSMB3P49720 205 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 TEPPQ6URK8 271 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 TVP23CQ96ET8 276 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 NPVFQ9HCQ7 196 aa10.13□□□□□ -0.79
LIMK1-201ENST00000336180 TIMM23O14925 209 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 HLA-DRB5Q30154 266 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 KLF17Q5JT82 389 aaPredicted RBP10.12□□□□□ -0.79
LIMK1-201ENST00000336180 NPIPB3Q92617 1050 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 RNF2Q99496 336 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 PARLQ9H300 379 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 DNAJC4Q9NNZ3 241 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 KAAG1Q9UBP8 84 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 NDUFB4O95168 129 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 VWC2Q2TAL6 325 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 SLC35E3Q7Z769 313 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 OR52E5Q8NH55 327 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 Q8WTZ3 238 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 ZANQ9Y493 2812 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 IGHV1-3A0A0C4DH29 117 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 M0R143 59 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 NDUFA6P56556 154 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 ZNF596Q8TC21 504 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 TMEM186Q96B77 213 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 NEIL1Q96FI4 390 aaPredicted RBP10.12□□□□□ -0.79
LIMK1-201ENST00000336180 CLEC7AQ9BXN2 247 aa10.12□□□□□ -0.79
LIMK1-201ENST00000336180 SH2D7A6NKC9 451 aaPredicted RBP10.11□□□□□ -0.79
LIMK1-201ENST00000336180 BUB1B-PAK6H3BSN5 160 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 M0QZK8 103 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 DPPA3Q6W0C5 159 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 ZNF114Q8NC26 417 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 OR1L8Q8NGR8 309 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 FAM210BQ96KR6 192 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 CSTL1Q9H114 145 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 SCO2A0A1W2PP80 73 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 PAX1P15863 534 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 HOXA5P20719 270 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 CDX1P47902 265 aaPredicted RBP10.11□□□□□ -0.79
LIMK1-201ENST00000336180 ZNF664Q8N3J9 261 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 OSR1Q8TAX0 266 aaPredicted RBP10.11□□□□□ -0.79
LIMK1-201ENST00000336180 RAB1CQ92928 201 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 YTHDF2Q9Y5A9 579 aaKnown RBP10.11□□□□□ -0.79
LIMK1-201ENST00000336180 TIMM9Q9Y5J7 89 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 CSPG4Q6UVK1 2322 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 TRAV1-1A0A0B4J248 108 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 OR7C2O60412 319 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 RPLP1P05386 114 aaKnown RBP10.11□□□□□ -0.79
LIMK1-201ENST00000336180 DYNAPQ8N1N2 210 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 P2RX4Q99571 388 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 NDUFA4L2Q9NRX3 87 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 BET1LQ9NYM9 111 aa10.11□□□□□ -0.79
LIMK1-201ENST00000336180 IFNA1P01562 189 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 RAB5AP20339 215 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 GPR6P46095 362 aaPredicted RBP10.1□□□□□ -0.79
LIMK1-201ENST00000336180 MFAP2P55001 183 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 MMDQ15546 238 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 TMEM177Q53S58 311 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 LEMD1Q68G75 181 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 TIMD4Q96H15 378 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 SGK494Q96LW2 274 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 LOC105371242A0A075B767 164 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 RND2P52198 227 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 ERHP84090 104 aaKnown RBP10.1□□□□□ -0.79
LIMK1-201ENST00000336180 MRGPRG-AS1Q2M3A8 158 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 C11orf71Q6IPW1 123 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 BEND2Q8NDZ0 799 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 OR1L6Q8NGR2 347 aa10.1□□□□□ -0.79
LIMK1-201ENST00000336180 SSBP3Q9BWW4 388 aaPredicted RBP10.1□□□□□ -0.79
LIMK1-201ENST00000336180 TOX4O94842 621 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms