RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 IL4P05112 153 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 SCGB1C2P0DMR2 95 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 C1orf61Q13536 156 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 IL11RAQ14626 422 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 RNF144BQ7Z419 303 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 MOB3BQ86TA1 216 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 IDI2-AS1Q9NZ38 188 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 PROCRQ9UNN8 238 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 TRAV8-2A0A0B4J237 113 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 ZNF840PA6NDX5 716 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 OOEPA6NGQ2 149 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 MPDU1O75352 247 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 CRLF1O75462 422 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 CRYGDP07320 174 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 CAMPP49913 170 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 HBBP68871 147 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 SRSF2Q01130 221 aaKnown RBP7.06□□□□□ -1.28
TDP1-201ENST00000335725 TINCRA0A1B0GVN0 87 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 IFI6P09912 130 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 MALP21145 153 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 SPRNQ5BIV9 151 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 Q6P435 159 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 ZAR1Q86SH2 424 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 FAM234AQ9H0X4 552 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 UQCRQO14949 82 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 SMCPP49901 116 aaPredicted RBP7.05□□□□□ -1.28
TDP1-201ENST00000335725 ZNF415Q09FC8 603 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 ZNF818PQ6ZRF7 136 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 SLC22A18ASQ8N1D0 253 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 CIARTQ8N365 385 aaPredicted RBP7.05□□□□□ -1.28
TDP1-201ENST00000335725 C3orf22Q8N5N4 141 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 GATD1Q8NB37 220 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 FCGR2AP12318 317 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 GCHFRP30047 84 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 FAM231DQ6ZW35 169 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 TIMM8BQ9Y5J9 83 aaPredicted RBP7.05□□□□□ -1.28
TDP1-201ENST00000335725 LTBP1Q14766 1721 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 HEATR5BQ9P2D3 2071 aa7.05□□□□□ -1.28
TDP1-201ENST00000335725 POLR2AP24928 1970 aaKnown RBP7.04□□□□□ -1.28
TDP1-201ENST00000335725 NDUFS7O75251 213 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 ATP5LO75964 103 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 FHL5Q5TD97 284 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 OR11H6Q8NGC7 330 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 C1orf43Q9BWL3 253 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 GOLGA4Q13439 2230 aaKnown RBP7.04□□□□□ -1.28
TDP1-201ENST00000335725 PRKNO60260 465 aaPredicted RBP7.04□□□□□ -1.28
TDP1-201ENST00000335725 TFF3Q07654 80 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 PCP2Q8IVA1 136 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 A0A0G2JRQ6 117 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 ENSAO43768 121 aaKnown RBP7.04□□□□□ -1.28
TDP1-201ENST00000335725 PGLYRP1O75594 196 aaPredicted RBP7.04□□□□□ -1.28
TDP1-201ENST00000335725 HMGA1P17096 107 aaKnown RBP7.04□□□□□ -1.28
TDP1-201ENST00000335725 MALLQ13021 153 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 MS4A18Q3C1V0 323 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 Q6ZVL8 140 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 SLC37A2Q8TED4 501 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 TIMD4Q96H15 378 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 AICDAQ9GZX7 198 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 PRNDQ9UKY0 176 aa7.04□□□□□ -1.28
TDP1-201ENST00000335725 SCTP09683 121 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 CISD3P0C7P0 127 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 CECR9P0C854 216 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 CCL1P22362 96 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 FOXA3P55318 350 aaPredicted RBP7.03□□□□□ -1.28
TDP1-201ENST00000335725 SRYQ05066 204 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 GDF5OSQ5U4N7 250 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 TDRD6O60522 2096 aaKnown RBP7.03□□□□□ -1.28
TDP1-201ENST00000335725 M0R2P5 195 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 PRDX1Q06830 199 aaKnown RBP7.03□□□□□ -1.28
TDP1-201ENST00000335725 MORN3Q6PF18 240 aaPredicted RBP7.03□□□□□ -1.28
TDP1-201ENST00000335725 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.03□□□□□ -1.28
TDP1-201ENST00000335725 BAALCQ8WXS3 180 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 TMEM167BQ9NRX6 74 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 PHF3Q92576 2039 aaKnown RBP7.03□□□□□ -1.28
TDP1-201ENST00000335725 GON4LQ3T8J9 2241 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 SHISA9B4DS77 424 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 HLA-DRB4P13762 266 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 PSMB2P49721 201 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 CST6Q15828 149 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 TREML4Q6UXN2 200 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 C3orf56Q8N813 242 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 TMUB1Q9BVT8 246 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 HLA-DRB4X5D2U9 266 aa7.03□□□□□ -1.28
TDP1-201ENST00000335725 IGKV1-9A0A0C4DH69 117 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 A0A1W2PQF6 199 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 CTGFP29279 349 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 ADAMTSL4Q6UY14 1074 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 RPRMLQ8N4K4 120 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 C15orf53Q8NAA6 179 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 OR8A1Q8NGG7 326 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 ZNF414Q96IQ9 312 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 PRRG4Q9BZD6 226 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 ATG2BQ96BY7 2078 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 A0A1B0GXF2 115 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 HOXA3O43365 443 aaPredicted RBP7.02□□□□□ -1.29
TDP1-201ENST00000335725 CLDN14O95500 239 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 EDDM3BP56851 147 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 TMEM196Q5HYL7 178 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 SBSPONQ8IVN8 264 aa7.02□□□□□ -1.29
TDP1-201ENST00000335725 LINC00526Q96FQ7 95 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms