RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SCARB1Q8WTV0 552 aa16.73■□□□□ 0.27
TPM1-204ENST00000334895 SLA2Q9H6Q3 261 aa16.73■□□□□ 0.27
TPM1-204ENST00000334895 CYTL1Q9NRR1 136 aa16.73■□□□□ 0.27
TPM1-204ENST00000334895 S4R3C0 116 aa16.73■□□□□ 0.27
TPM1-204ENST00000334895 TMEM89A2RUT3 159 aa16.72■□□□□ 0.27
TPM1-204ENST00000334895 TPPP2P59282 170 aa16.72■□□□□ 0.27
TPM1-204ENST00000334895 FOXE3Q13461 319 aa16.72■□□□□ 0.27
TPM1-204ENST00000334895 KIAA0141Q14154 515 aaPredicted RBP16.72■□□□□ 0.27
TPM1-204ENST00000334895 GAMTQ14353 236 aa16.72■□□□□ 0.27
TPM1-204ENST00000334895 C15orf32Q32M92 178 aa16.72■□□□□ 0.27
TPM1-204ENST00000334895 RNF152Q8N8N0 203 aa16.72■□□□□ 0.27
TPM1-204ENST00000334895 CACNG8Q8WXS5 425 aa16.72■□□□□ 0.27
TPM1-204ENST00000334895 GGACTQ9BVM4 153 aa16.72■□□□□ 0.27
TPM1-204ENST00000334895 THYN1Q9P016 225 aa16.72■□□□□ 0.27
TPM1-204ENST00000334895 CLPSL1A2RUU4 121 aa16.71■□□□□ 0.27
TPM1-204ENST00000334895 ELANEP08246 267 aa16.71■□□□□ 0.27
TPM1-204ENST00000334895 PROK1P58294 105 aa16.71■□□□□ 0.27
TPM1-204ENST00000334895 TCTEX1D4Q5JR98 221 aa16.71■□□□□ 0.27
TPM1-204ENST00000334895 OR5AU1Q8NGC0 362 aa16.71■□□□□ 0.27
TPM1-204ENST00000334895 MDFIQ99750 246 aa16.71■□□□□ 0.27
TPM1-204ENST00000334895 ATP5SQ99766 215 aa16.71■□□□□ 0.27
TPM1-204ENST00000334895 TMEM147Q9BVK8 224 aa16.71■□□□□ 0.27
TPM1-204ENST00000334895 RNF114Q9Y508 228 aa16.71■□□□□ 0.27
TPM1-204ENST00000334895 FAM223BA6NKX1 122 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 BCL2L11O43521 198 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 RPLP1P05386 114 aaKnown RBP16.7■□□□□ 0.26
TPM1-204ENST00000334895 ATP6V1FQ16864 119 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 FAM223AQ8IWN6 122 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 MYOZ3Q8TDC0 251 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 TMEM158Q8WZ71 300 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 ARPC5LQ9BPX5 153 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 UQCC1Q9NVA1 299 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 RPS10-NUDT3A0A1W2PQS6 291 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 F8W735 103 aaPredicted RBP16.7■□□□□ 0.26
TPM1-204ENST00000334895 IGHV3-23P01764 117 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 ETFRF1Q6IPR1 90 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 VN1R17PQ8TDU5 208 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 C19orf24Q9BVV8 132 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 COL6A5A8TX70 2615 aa16.7■□□□□ 0.26
TPM1-204ENST00000334895 UBE2L5PA0A1B0GUS4 154 aa16.69■□□□□ 0.26
TPM1-204ENST00000334895 FNDC10F2Z333 226 aa16.69■□□□□ 0.26
TPM1-204ENST00000334895 RND2P52198 227 aa16.69■□□□□ 0.26
TPM1-204ENST00000334895 OPCMLQ14982 345 aa16.69■□□□□ 0.26
TPM1-204ENST00000334895 RPL7L1Q6DKI1 246 aaKnown RBP16.69■□□□□ 0.26
TPM1-204ENST00000334895 TREML4Q6UXN2 200 aa16.69■□□□□ 0.26
TPM1-204ENST00000334895 COMMD1Q8N668 190 aa16.69■□□□□ 0.26
TPM1-204ENST00000334895 ACY3Q96HD9 319 aa16.69■□□□□ 0.26
TPM1-204ENST00000334895 IGKV1OR2-108A0A075B7D4 117 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 A0A1B0GUS0 222 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 KANTRA0A1W2PQU2 76 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 SMCO3A2RU48 225 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 TAAR5O14804 337 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 ATP5G2Q06055 141 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 TMEM116Q8NCL8 245 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 ZNF502Q8TBZ5 544 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 NPIPB3Q92617 1050 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 SLC35E1Q96K37 410 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 CCDC140Q96MF4 163 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 C21orf62Q9NYP8 219 aa16.68■□□□□ 0.26
TPM1-204ENST00000334895 HAX1O00165 279 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 DFFBO76075 338 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 HIST2H2BDQ6DRA6 164 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 ACSM6Q6P461 480 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 OR4X1Q8NH49 305 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 USMG5Q96IX5 58 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 AKR1C1Q04828 323 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 TMEM144Q7Z5S9 345 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 ZNF491Q8N8L2 437 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 CXorf58Q96LI9 332 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 NPVFQ9HCQ7 196 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 WDR83OSQ9Y284 106 aa16.67■□□□□ 0.26
TPM1-204ENST00000334895 LSM4Q9Y4Z0 139 aaKnown RBP16.67■□□□□ 0.26
TPM1-204ENST00000334895 IGKV1D-37A0A075B6S9 117 aa16.66■□□□□ 0.26
TPM1-204ENST00000334895 IGHV3-11P01762 117 aa16.66■□□□□ 0.26
TPM1-204ENST00000334895 FCGR2BP31994 310 aaPredicted RBP16.66■□□□□ 0.26
TPM1-204ENST00000334895 WDR61Q9GZS3 305 aaKnown RBP16.66■□□□□ 0.26
TPM1-204ENST00000334895 CD28P10747 220 aa16.65■□□□□ 0.26
TPM1-204ENST00000334895 MFAP4P55083 255 aa16.65■□□□□ 0.26
TPM1-204ENST00000334895 KRTAP10-3P60369 221 aa16.65■□□□□ 0.26
TPM1-204ENST00000334895 THAP8Q8NA92 274 aa16.65■□□□□ 0.26
TPM1-204ENST00000334895 UBAC2Q8NBM4 344 aa16.65■□□□□ 0.26
TPM1-204ENST00000334895 OR4X2Q8NGF9 303 aa16.65■□□□□ 0.26
TPM1-204ENST00000334895 EEF1AKMT3Q96AZ1 226 aa16.65■□□□□ 0.26
TPM1-204ENST00000334895 ZNF471Q9BX82 626 aaPredicted RBP16.65■□□□□ 0.26
TPM1-204ENST00000334895 A0A0G2JLM5 398 aa16.64■□□□□ 0.25
TPM1-204ENST00000334895 CLN5O75503 358 aa16.64■□□□□ 0.25
TPM1-204ENST00000334895 ZNF266Q14584 549 aa16.64■□□□□ 0.25
TPM1-204ENST00000334895 C11orf44Q8N8P7 122 aa16.64■□□□□ 0.25
TPM1-204ENST00000334895 GNB4Q9HAV0 340 aa16.64■□□□□ 0.25
TPM1-204ENST00000334895 TRBV7-1A0A0A6YYK4 115 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 IGLC1P0CG04 106 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 FGF7P21781 194 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 FOXL1Q12952 345 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 Q56UQ5 140 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 ZNF343Q6P1L6 599 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 BTNL8Q6UX41 500 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 MGST2Q99735 147 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 PARD6GQ9BYG4 376 aaPredicted RBP16.63■□□□□ 0.25
TPM1-204ENST00000334895 ARV1Q9H2C2 271 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 RFNGQ9Y644 331 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms