RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 IGHV3-49A0A0A0MS15 119 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 SNURFLB1AK76 121 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 SPSB3Q6PJ21 355 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 OR4D5Q8NGN0 318 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 KIAA1549LQ6ZVL6 1849 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 ZNF207O43670 478 aaKnown RBP9.2□□□□□ -0.94
POLR1B-202ENST00000333990 FABP4P15090 132 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 FCER1GP30273 86 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 ZNF880Q6PDB4 577 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 SRSF8Q9BRL6 282 aaKnown RBP9.2□□□□□ -0.94
POLR1B-202ENST00000333990 WDR83OSQ9Y284 106 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 SHANK1Q9Y566 2161 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 IGHV3OR16-12A0A075B7B8 117 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 IGHV2-70DA0A0C4DH43 119 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 CD5P06127 495 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 TFF3Q07654 80 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 ZNF705AQ6ZN79 300 aaPredicted RBP9.2□□□□□ -0.94
POLR1B-202ENST00000333990 TMEM190Q8WZ59 177 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 Q96MF0 132 aa9.2□□□□□ -0.94
POLR1B-202ENST00000333990 AURKAIP1Q9NWT8 199 aaPredicted RBP9.2□□□□□ -0.94
POLR1B-202ENST00000333990 ZNF106Q9H2Y7 1883 aaKnown RBP9.2□□□□□ -0.94
POLR1B-202ENST00000333990 A0A1W2PRX2 142 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 HLA-DRB1P01911 266 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 CMC4P56277 68 aaPredicted RBP9.19□□□□□ -0.94
POLR1B-202ENST00000333990 TMEM219Q86XT9 240 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 TRAV14DV4A0A0A6YYC5 116 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 IGLV3-1P01715 115 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 TRGC1P0CF51 173 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 ANOS1P23352 680 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 PAX8Q06710 450 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 ZNF383Q8NA42 475 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 TMEM116Q8NCL8 245 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 SIGLEC9Q9Y336 463 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 YLPM1P49750 1951 aaKnown RBP9.19□□□□□ -0.94
POLR1B-202ENST00000333990 ALPK3Q96L96 1907 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 RNF222A6NCQ9 220 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 GGCTO75223 188 aaKnown RBP9.19□□□□□ -0.94
POLR1B-202ENST00000333990 TDGF1P3P51864 188 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 FBXL19-AS1Q494R0 122 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 TEX38Q6PEX7 206 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 USMG5Q96IX5 58 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 ARL2-SNX15V9GYD0 113 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 PCDH15Q96QU1 1955 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 IGHV1-69DA0A0B4J2H0 117 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 NPIPB6E9PJ23 425 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 H3BTX0 84 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 IGHV1-69P01742 117 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 CSN3P07498 182 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 OR5AL1P0C617 328 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 LY6G6FQ5SQ64 297 aa9.19□□□□□ -0.94
POLR1B-202ENST00000333990 EIF4E3Q8N5X7 224 aaKnown RBP9.19□□□□□ -0.94
POLR1B-202ENST00000333990 IGF2RP11717 2491 aa9.18□□□□□ -0.94
POLR1B-202ENST00000333990 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.18□□□□□ -0.94
POLR1B-202ENST00000333990 SHISA9B4DS77 424 aa9.18□□□□□ -0.94
POLR1B-202ENST00000333990 C10orf142B7Z368 130 aa9.18□□□□□ -0.94
POLR1B-202ENST00000333990 LOXP28300 417 aaPredicted RBP9.18□□□□□ -0.94
POLR1B-202ENST00000333990 IER3P46695 156 aa9.18□□□□□ -0.94
POLR1B-202ENST00000333990 FAM3BP58499 235 aaPredicted RBP9.18□□□□□ -0.94
POLR1B-202ENST00000333990 NMSQ5H8A3 153 aa9.18□□□□□ -0.94
POLR1B-202ENST00000333990 OR4C46A6NHA9 309 aa9.18□□□□□ -0.94
POLR1B-202ENST00000333990 FOXI3A8MTJ6 420 aaPredicted RBP9.18□□□□□ -0.94
POLR1B-202ENST00000333990 SUPT4H1P63272 117 aaKnown RBP9.18□□□□□ -0.94
POLR1B-202ENST00000333990 TWIST1Q15672 202 aa9.18□□□□□ -0.94
POLR1B-202ENST00000333990 C10orf55Q5SWW7 151 aa9.18□□□□□ -0.94
POLR1B-202ENST00000333990 RNF126Q9BV68 326 aa9.18□□□□□ -0.94
POLR1B-202ENST00000333990 PARLQ9H300 379 aa9.18□□□□□ -0.94
POLR1B-202ENST00000333990 PTPRSQ13332 1948 aa9.18□□□□□ -0.94
POLR1B-202ENST00000333990 DUSP14O95147 198 aaKnown RBP9.17□□□□□ -0.94
POLR1B-202ENST00000333990 VENTXO95231 258 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 GCGP01275 180 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 APCSP02743 223 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 PRSS1P07477 247 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 C15orf32Q32M92 178 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 ZNF506Q5JVG8 444 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 LINC00311Q8N616 119 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 KIR3DL3Q8N743 410 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 ISOC2Q96AB3 205 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 C1orf147Q96MC9 270 aaPredicted RBP9.17□□□□□ -0.94
POLR1B-202ENST00000333990 PTPN13Q12923 2485 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 A0A0B4J293 547 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 HLA-DQA1P01909 254 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 CD99P14209 185 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 WDR86Q86TI4 376 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 DEFA6Q01524 100 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 DAZAP2Q15038 168 aaPredicted RBP9.17□□□□□ -0.94
POLR1B-202ENST00000333990 CR1LQ2VPA4 569 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 ITLN2Q8WWU7 325 aaPredicted RBP9.17□□□□□ -0.94
POLR1B-202ENST00000333990 CDC42EP3Q9UKI2 254 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 A0A1B0GWJ7 208 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 LINC00473A8K010 186 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 PRORYQ9H606 182 aa9.17□□□□□ -0.94
POLR1B-202ENST00000333990 TMEM131Q92545 1883 aa9.16□□□□□ -0.94
POLR1B-202ENST00000333990 IGKV1-5P01602 117 aa9.16□□□□□ -0.94
POLR1B-202ENST00000333990 SOD3P08294 240 aa9.16□□□□□ -0.94
POLR1B-202ENST00000333990 ADORA2A-AS1P86434 159 aa9.16□□□□□ -0.94
POLR1B-202ENST00000333990 C11orf42Q8N5U0 333 aa9.16□□□□□ -0.94
POLR1B-202ENST00000333990 OR10W1Q8NGF6 305 aa9.16□□□□□ -0.94
POLR1B-202ENST00000333990 SPOCK3Q9BQ16 436 aa9.16□□□□□ -0.94
POLR1B-202ENST00000333990 REG4Q9BYZ8 158 aa9.16□□□□□ -0.94
POLR1B-202ENST00000333990 NIT2Q9NQR4 276 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms